Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NKX2-2O95096 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
NKX2-2O95096 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NKX2-2O95096 RARRES2P6-201ENST00000567333 442 ntBASIC19.33■□□□□ 0.68
NKX2-2O95096 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.33■□□□□ 0.68
NKX2-2O95096 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
NKX2-2O95096 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
NKX2-2O95096 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NKX2-2O95096 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NKX2-2O95096 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NKX2-2O95096 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.32■□□□□ 0.68
NKX2-2O95096 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NKX2-2O95096 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NKX2-2O95096 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
NKX2-2O95096 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NKX2-2O95096 SLC7A5P2-201ENST00000553010 536 ntBASIC19.32■□□□□ 0.68
NKX2-2O95096 NTF6G-201ENST00000591094 616 ntBASIC19.32■□□□□ 0.68
NKX2-2O95096 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.32■□□□□ 0.68
NKX2-2O95096 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
NKX2-2O95096 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NKX2-2O95096 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NKX2-2O95096 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NKX2-2O95096 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NKX2-2O95096 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.31■□□□□ 0.68
NKX2-2O95096 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NKX2-2O95096 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NKX2-2O95096 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
NKX2-2O95096 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NKX2-2O95096 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NKX2-2O95096 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
NKX2-2O95096 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.31■□□□□ 0.68
NKX2-2O95096 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.31■□□□□ 0.68
NKX2-2O95096 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
NKX2-2O95096 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NKX2-2O95096 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.31■□□□□ 0.68
NKX2-2O95096 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.31■□□□□ 0.68
NKX2-2O95096 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NKX2-2O95096 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NKX2-2O95096 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NKX2-2O95096 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NKX2-2O95096 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NKX2-2O95096 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NKX2-2O95096 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NKX2-2O95096 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NKX2-2O95096 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NKX2-2O95096 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC19.3■□□□□ 0.68
NKX2-2O95096 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NKX2-2O95096 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
NKX2-2O95096 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NKX2-2O95096 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.3■□□□□ 0.68
NKX2-2O95096 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.3■□□□□ 0.68
NKX2-2O95096 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NKX2-2O95096 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NKX2-2O95096 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.3■□□□□ 0.68
NKX2-2O95096 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NKX2-2O95096 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NKX2-2O95096 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.29■□□□□ 0.68
NKX2-2O95096 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NKX2-2O95096 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NKX2-2O95096 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.29■□□□□ 0.68
NKX2-2O95096 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.29■□□□□ 0.68
NKX2-2O95096 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.29■□□□□ 0.68
NKX2-2O95096 SLC7A5P1-201ENST00000568957 537 ntBASIC19.29■□□□□ 0.68
NKX2-2O95096 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NKX2-2O95096 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NKX2-2O95096 RARRES2P11-201ENST00000635158 484 ntBASIC19.29■□□□□ 0.68
NKX2-2O95096 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NKX2-2O95096 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
NKX2-2O95096 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NKX2-2O95096 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NKX2-2O95096 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
NKX2-2O95096 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.28■□□□□ 0.68
NKX2-2O95096 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NKX2-2O95096 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NKX2-2O95096 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NKX2-2O95096 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NKX2-2O95096 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
NKX2-2O95096 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.28■□□□□ 0.68
NKX2-2O95096 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.28■□□□□ 0.68
NKX2-2O95096 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.28■□□□□ 0.68
NKX2-2O95096 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NKX2-2O95096 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NKX2-2O95096 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.28■□□□□ 0.68
NKX2-2O95096 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NKX2-2O95096 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NKX2-2O95096 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NKX2-2O95096 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NKX2-2O95096 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
NKX2-2O95096 AC245052.3-201ENST00000450182 901 ntBASIC19.27■□□□□ 0.68
NKX2-2O95096 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NKX2-2O95096 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
NKX2-2O95096 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NKX2-2O95096 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.27■□□□□ 0.67
NKX2-2O95096 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.27■□□□□ 0.67
NKX2-2O95096 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NKX2-2O95096 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
NKX2-2O95096 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NKX2-2O95096 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NKX2-2O95096 KRT18P5-201ENST00000436075 1291 ntBASIC19.26■□□□□ 0.67
NKX2-2O95096 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms