Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLPXO76031 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.92■□□□□ 0.62
CLPXO76031 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLPXO76031 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLPXO76031 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLPXO76031 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.92■□□□□ 0.62
CLPXO76031 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CLPXO76031 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLPXO76031 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CLPXO76031 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLPXO76031 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.91■□□□□ 0.62
CLPXO76031 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLPXO76031 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
CLPXO76031 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLPXO76031 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
CLPXO76031 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.91■□□□□ 0.62
CLPXO76031 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CLPXO76031 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.91■□□□□ 0.62
CLPXO76031 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLPXO76031 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.91■□□□□ 0.62
CLPXO76031 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLPXO76031 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.91■□□□□ 0.62
CLPXO76031 KRT125P-201ENST00000546827 989 ntBASIC18.91■□□□□ 0.62
CLPXO76031 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLPXO76031 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLPXO76031 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLPXO76031 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLPXO76031 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLPXO76031 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLPXO76031 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLPXO76031 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLPXO76031 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLPXO76031 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.91■□□□□ 0.62
CLPXO76031 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.91■□□□□ 0.62
CLPXO76031 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CLPXO76031 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLPXO76031 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLPXO76031 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CLPXO76031 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLPXO76031 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLPXO76031 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.9■□□□□ 0.62
CLPXO76031 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLPXO76031 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLPXO76031 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.9■□□□□ 0.62
CLPXO76031 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLPXO76031 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLPXO76031 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLPXO76031 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CLPXO76031 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC18.9■□□□□ 0.62
CLPXO76031 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLPXO76031 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CLPXO76031 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.9■□□□□ 0.62
CLPXO76031 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CLPXO76031 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.9■□□□□ 0.62
CLPXO76031 C17orf82-201ENST00000623772 1530 ntBASIC18.9■□□□□ 0.62
CLPXO76031 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
CLPXO76031 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CLPXO76031 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLPXO76031 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.89■□□□□ 0.61
CLPXO76031 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLPXO76031 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLPXO76031 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLPXO76031 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CLPXO76031 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.89■□□□□ 0.61
CLPXO76031 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.89■□□□□ 0.61
CLPXO76031 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CLPXO76031 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLPXO76031 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLPXO76031 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLPXO76031 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLPXO76031 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.89■□□□□ 0.61
CLPXO76031 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLPXO76031 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.89■□□□□ 0.61
CLPXO76031 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
CLPXO76031 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLPXO76031 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.88■□□□□ 0.61
CLPXO76031 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLPXO76031 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CLPXO76031 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLPXO76031 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLPXO76031 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLPXO76031 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.88■□□□□ 0.61
CLPXO76031 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.88■□□□□ 0.61
CLPXO76031 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.88■□□□□ 0.61
CLPXO76031 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.88■□□□□ 0.61
CLPXO76031 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.88■□□□□ 0.61
CLPXO76031 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.88■□□□□ 0.61
CLPXO76031 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.88■□□□□ 0.61
CLPXO76031 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLPXO76031 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLPXO76031 AC006128.1-201ENST00000624704 1661 ntBASIC18.88■□□□□ 0.61
CLPXO76031 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLPXO76031 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLPXO76031 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLPXO76031 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLPXO76031 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLPXO76031 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLPXO76031 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLPXO76031 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLPXO76031 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms