Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF253O75346 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF253O75346 OR2A1-AS1-204ENST00000470435 602 ntBASIC16.19■□□□□ 0.18
ZNF253O75346 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC16.19■□□□□ 0.18
ZNF253O75346 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC16.19■□□□□ 0.18
ZNF253O75346 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF253O75346 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ZNF253O75346 AL138724.1-201ENST00000606771 1088 ntBASIC16.19■□□□□ 0.18
ZNF253O75346 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
ZNF253O75346 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC16.19■□□□□ 0.18
ZNF253O75346 AC026471.6-201ENST00000622954 1905 ntBASIC16.19■□□□□ 0.18
ZNF253O75346 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
ZNF253O75346 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
ZNF253O75346 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
ZNF253O75346 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
ZNF253O75346 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
ZNF253O75346 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF253O75346 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF253O75346 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
ZNF253O75346 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
ZNF253O75346 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
ZNF253O75346 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC16.18■□□□□ 0.18
ZNF253O75346 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF253O75346 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.18■□□□□ 0.18
ZNF253O75346 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC16.18■□□□□ 0.18
ZNF253O75346 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.18■□□□□ 0.18
ZNF253O75346 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF253O75346 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
ZNF253O75346 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
ZNF253O75346 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF253O75346 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC16.18■□□□□ 0.18
ZNF253O75346 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF253O75346 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC16.18■□□□□ 0.18
ZNF253O75346 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF253O75346 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF253O75346 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ZNF253O75346 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
ZNF253O75346 ADM-207ENST00000530439 1839 ntTSL 2 BASIC16.17■□□□□ 0.18
ZNF253O75346 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF253O75346 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF253O75346 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF253O75346 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC16.17■□□□□ 0.18
ZNF253O75346 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF253O75346 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC16.17■□□□□ 0.18
ZNF253O75346 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC16.17■□□□□ 0.18
ZNF253O75346 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF253O75346 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
ZNF253O75346 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF253O75346 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC16.17■□□□□ 0.18
ZNF253O75346 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF253O75346 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
ZNF253O75346 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
ZNF253O75346 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF253O75346 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.17■□□□□ 0.18
ZNF253O75346 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.17■□□□□ 0.18
ZNF253O75346 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC16.17■□□□□ 0.18
ZNF253O75346 PARN-205ENST00000539279 1557 ntTSL 2 BASIC16.17■□□□□ 0.18
ZNF253O75346 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ZNF253O75346 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF253O75346 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC16.16■□□□□ 0.18
ZNF253O75346 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
ZNF253O75346 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF253O75346 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC16.16■□□□□ 0.18
ZNF253O75346 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF253O75346 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF253O75346 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.16■□□□□ 0.18
ZNF253O75346 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.16■□□□□ 0.18
ZNF253O75346 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
ZNF253O75346 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF253O75346 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF253O75346 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF253O75346 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF253O75346 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF253O75346 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.16■□□□□ 0.18
ZNF253O75346 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC16.16■□□□□ 0.18
ZNF253O75346 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF253O75346 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF253O75346 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.16■□□□□ 0.18
ZNF253O75346 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
ZNF253O75346 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF253O75346 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF253O75346 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
ZNF253O75346 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC16.16■□□□□ 0.18
ZNF253O75346 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
ZNF253O75346 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
ZNF253O75346 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF253O75346 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF253O75346 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF253O75346 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF253O75346 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC16.15■□□□□ 0.18
ZNF253O75346 AP005435.1-201ENST00000529293 1178 ntBASIC16.15■□□□□ 0.18
ZNF253O75346 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC16.15■□□□□ 0.18
ZNF253O75346 DUX4L19-201ENST00000557448 1267 ntBASIC16.15■□□□□ 0.18
ZNF253O75346 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC16.15■□□□□ 0.18
ZNF253O75346 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
ZNF253O75346 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF253O75346 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF253O75346 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF253O75346 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
ZNF253O75346 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms