Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.58■■□□□ 1.05
TSPAN3O60637 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
TSPAN3O60637 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
TSPAN3O60637 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.58■■□□□ 1.04
TSPAN3O60637 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TSPAN3O60637 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
TSPAN3O60637 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.57■■□□□ 1.04
TSPAN3O60637 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.57■■□□□ 1.04
TSPAN3O60637 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TSPAN3O60637 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.57■■□□□ 1.04
TSPAN3O60637 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.57■■□□□ 1.04
TSPAN3O60637 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TSPAN3O60637 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.57■■□□□ 1.04
TSPAN3O60637 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TSPAN3O60637 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
TSPAN3O60637 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TSPAN3O60637 AL355802.2-201ENST00000402069 882 ntBASIC21.57■■□□□ 1.04
TSPAN3O60637 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.57■■□□□ 1.04
TSPAN3O60637 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TSPAN3O60637 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.57■■□□□ 1.04
TSPAN3O60637 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TSPAN3O60637 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.57■■□□□ 1.04
TSPAN3O60637 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TSPAN3O60637 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TSPAN3O60637 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TSPAN3O60637 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TSPAN3O60637 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TSPAN3O60637 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.56■■□□□ 1.04
TSPAN3O60637 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
TSPAN3O60637 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TSPAN3O60637 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TSPAN3O60637 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.56■■□□□ 1.04
TSPAN3O60637 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
TSPAN3O60637 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.56■■□□□ 1.04
TSPAN3O60637 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TSPAN3O60637 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.56■■□□□ 1.04
TSPAN3O60637 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
TSPAN3O60637 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
TSPAN3O60637 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TSPAN3O60637 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TSPAN3O60637 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TSPAN3O60637 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.56■■□□□ 1.04
TSPAN3O60637 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TSPAN3O60637 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.55■■□□□ 1.04
TSPAN3O60637 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.55■■□□□ 1.04
TSPAN3O60637 CYP2T1P-201ENST00000432607 1285 ntBASIC21.55■■□□□ 1.04
TSPAN3O60637 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.55■■□□□ 1.04
TSPAN3O60637 AC105036.2-201ENST00000569468 176 ntBASIC21.55■■□□□ 1.04
TSPAN3O60637 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.55■■□□□ 1.04
TSPAN3O60637 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.55■■□□□ 1.04
TSPAN3O60637 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.55■■□□□ 1.04
TSPAN3O60637 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.55■■□□□ 1.04
TSPAN3O60637 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TSPAN3O60637 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TSPAN3O60637 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.55■■□□□ 1.04
TSPAN3O60637 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TSPAN3O60637 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TSPAN3O60637 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TSPAN3O60637 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TSPAN3O60637 FBXW4P1-201ENST00000426721 2239 ntBASIC21.54■■□□□ 1.04
TSPAN3O60637 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TSPAN3O60637 AC007322.4-201ENST00000509611 723 ntBASIC21.54■■□□□ 1.04
TSPAN3O60637 AF201337.1-201ENST00000520239 748 ntBASIC21.54■■□□□ 1.04
TSPAN3O60637 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
TSPAN3O60637 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TSPAN3O60637 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TSPAN3O60637 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TSPAN3O60637 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TSPAN3O60637 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.53■■□□□ 1.04
TSPAN3O60637 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
TSPAN3O60637 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.53■■□□□ 1.04
TSPAN3O60637 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.53■■□□□ 1.04
TSPAN3O60637 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.53■■□□□ 1.04
TSPAN3O60637 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.53■■□□□ 1.04
TSPAN3O60637 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.53■■□□□ 1.04
TSPAN3O60637 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TSPAN3O60637 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TSPAN3O60637 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
TSPAN3O60637 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.53■■□□□ 1.04
TSPAN3O60637 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
TSPAN3O60637 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.53■■□□□ 1.04
TSPAN3O60637 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TSPAN3O60637 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TSPAN3O60637 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TSPAN3O60637 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TSPAN3O60637 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.52■■□□□ 1.04
TSPAN3O60637 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TSPAN3O60637 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.52■■□□□ 1.04
TSPAN3O60637 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TSPAN3O60637 TSPY6P-201ENST00000448518 926 ntBASIC21.52■■□□□ 1.04
TSPAN3O60637 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
TSPAN3O60637 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.52■■□□□ 1.04
TSPAN3O60637 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.52■■□□□ 1.04
TSPAN3O60637 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TSPAN3O60637 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TSPAN3O60637 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
TSPAN3O60637 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
TSPAN3O60637 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
TSPAN3O60637 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TSPAN3O60637 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms