Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.95■□□□□ 0.78
PCDH7O60245 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
PCDH7O60245 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDH7O60245 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDH7O60245 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDH7O60245 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDH7O60245 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDH7O60245 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
PCDH7O60245 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
PCDH7O60245 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.95■□□□□ 0.78
PCDH7O60245 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDH7O60245 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
PCDH7O60245 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
PCDH7O60245 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
PCDH7O60245 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDH7O60245 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDH7O60245 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCDH7O60245 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.94■□□□□ 0.78
PCDH7O60245 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDH7O60245 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCDH7O60245 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
PCDH7O60245 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCDH7O60245 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDH7O60245 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDH7O60245 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDH7O60245 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDH7O60245 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDH7O60245 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCDH7O60245 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
PCDH7O60245 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.94■□□□□ 0.78
PCDH7O60245 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDH7O60245 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
PCDH7O60245 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
PCDH7O60245 KRT87P-202ENST00000534226 1464 ntBASIC19.93■□□□□ 0.78
PCDH7O60245 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.93■□□□□ 0.78
PCDH7O60245 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
PCDH7O60245 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.93■□□□□ 0.78
PCDH7O60245 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDH7O60245 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.93■□□□□ 0.78
PCDH7O60245 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.93■□□□□ 0.78
PCDH7O60245 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDH7O60245 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDH7O60245 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDH7O60245 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDH7O60245 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.93■□□□□ 0.78
PCDH7O60245 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDH7O60245 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.92■□□□□ 0.78
PCDH7O60245 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDH7O60245 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.92■□□□□ 0.78
PCDH7O60245 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDH7O60245 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
PCDH7O60245 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDH7O60245 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PCDH7O60245 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDH7O60245 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDH7O60245 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
PCDH7O60245 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.92■□□□□ 0.78
PCDH7O60245 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PCDH7O60245 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDH7O60245 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.91■□□□□ 0.78
PCDH7O60245 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.91■□□□□ 0.78
PCDH7O60245 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDH7O60245 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
PCDH7O60245 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDH7O60245 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDH7O60245 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.91■□□□□ 0.78
PCDH7O60245 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.91■□□□□ 0.78
PCDH7O60245 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.91■□□□□ 0.78
PCDH7O60245 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDH7O60245 LINC02228-203ENST00000641970 1355 ntBASIC19.91■□□□□ 0.78
PCDH7O60245 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDH7O60245 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.91■□□□□ 0.78
PCDH7O60245 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDH7O60245 AC061975.6-201ENST00000579045 1553 ntBASIC19.91■□□□□ 0.78
PCDH7O60245 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDH7O60245 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.91■□□□□ 0.78
PCDH7O60245 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDH7O60245 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PCDH7O60245 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PCDH7O60245 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDH7O60245 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDH7O60245 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDH7O60245 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PCDH7O60245 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.9■□□□□ 0.78
PCDH7O60245 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PCDH7O60245 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.9■□□□□ 0.78
PCDH7O60245 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
PCDH7O60245 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDH7O60245 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDH7O60245 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
PCDH7O60245 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.9■□□□□ 0.78
PCDH7O60245 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
PCDH7O60245 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDH7O60245 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDH7O60245 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDH7O60245 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.89■□□□□ 0.77
PCDH7O60245 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
PCDH7O60245 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PCDH7O60245 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.89■□□□□ 0.77
PCDH7O60245 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms