Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AL034346.1-201ENST00000568244 1277 ntBASIC17.02■□□□□ 0.32
SSSCA1O60232 Z92544.1-202ENST00000571933 1220 ntBASIC17.02■□□□□ 0.32
SSSCA1O60232 AC068587.7-201ENST00000641602 218 ntBASIC17.02■□□□□ 0.32
SSSCA1O60232 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
SSSCA1O60232 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SSSCA1O60232 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
SSSCA1O60232 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SSSCA1O60232 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SSSCA1O60232 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.02■□□□□ 0.31
SSSCA1O60232 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SSSCA1O60232 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SSSCA1O60232 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SSSCA1O60232 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SSSCA1O60232 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SSSCA1O60232 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SSSCA1O60232 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SSSCA1O60232 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SSSCA1O60232 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SSSCA1O60232 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SSSCA1O60232 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC17.01■□□□□ 0.31
SSSCA1O60232 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SSSCA1O60232 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
SSSCA1O60232 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
SSSCA1O60232 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SSSCA1O60232 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.01■□□□□ 0.31
SSSCA1O60232 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SSSCA1O60232 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SSSCA1O60232 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
SSSCA1O60232 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17■□□□□ 0.31
SSSCA1O60232 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SSSCA1O60232 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SSSCA1O60232 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC17■□□□□ 0.31
SSSCA1O60232 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SSSCA1O60232 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SSSCA1O60232 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17■□□□□ 0.31
SSSCA1O60232 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17■□□□□ 0.31
SSSCA1O60232 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SSSCA1O60232 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SSSCA1O60232 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SSSCA1O60232 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC17■□□□□ 0.31
SSSCA1O60232 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC17■□□□□ 0.31
SSSCA1O60232 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17■□□□□ 0.31
SSSCA1O60232 pRNA.6-201ENST00000610482 90 ntBASIC17■□□□□ 0.31
SSSCA1O60232 pRNA.5-201ENST00000612139 90 ntBASIC17■□□□□ 0.31
SSSCA1O60232 pRNA.11-201ENST00000618423 90 ntBASIC17■□□□□ 0.31
SSSCA1O60232 pRNA.13-201ENST00000619112 90 ntBASIC17■□□□□ 0.31
SSSCA1O60232 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC17■□□□□ 0.31
SSSCA1O60232 AC241377.3-202ENST00000626088 1088 ntBASIC17■□□□□ 0.31
SSSCA1O60232 AC241585.3-202ENST00000628937 1088 ntBASIC17■□□□□ 0.31
SSSCA1O60232 AC245100.8-202ENST00000629247 1058 ntBASIC17■□□□□ 0.31
SSSCA1O60232 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SSSCA1O60232 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17■□□□□ 0.31
SSSCA1O60232 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SSSCA1O60232 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17■□□□□ 0.31
SSSCA1O60232 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17■□□□□ 0.31
SSSCA1O60232 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17■□□□□ 0.31
SSSCA1O60232 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SSSCA1O60232 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SSSCA1O60232 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SSSCA1O60232 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SSSCA1O60232 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SSSCA1O60232 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SSSCA1O60232 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC16.99■□□□□ 0.31
SSSCA1O60232 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SSSCA1O60232 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC16.99■□□□□ 0.31
SSSCA1O60232 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SSSCA1O60232 KRT125P-201ENST00000546827 989 ntBASIC16.99■□□□□ 0.31
SSSCA1O60232 AL033527.3-201ENST00000566366 1196 ntBASIC16.99■□□□□ 0.31
SSSCA1O60232 AL117332.1-201ENST00000622628 974 ntBASIC16.99■□□□□ 0.31
SSSCA1O60232 EXOG-217ENST00000630638 197 ntTSL 5 BASIC16.99■□□□□ 0.31
SSSCA1O60232 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SSSCA1O60232 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SSSCA1O60232 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SSSCA1O60232 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SSSCA1O60232 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC16.99■□□□□ 0.31
SSSCA1O60232 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC16.99■□□□□ 0.31
SSSCA1O60232 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SSSCA1O60232 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.99■□□□□ 0.31
SSSCA1O60232 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SSSCA1O60232 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
SSSCA1O60232 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SSSCA1O60232 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
SSSCA1O60232 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SSSCA1O60232 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
SSSCA1O60232 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SSSCA1O60232 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC16.98■□□□□ 0.31
SSSCA1O60232 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SSSCA1O60232 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC16.98■□□□□ 0.31
SSSCA1O60232 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC16.98■□□□□ 0.31
SSSCA1O60232 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC16.98■□□□□ 0.31
SSSCA1O60232 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SSSCA1O60232 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
SSSCA1O60232 AC027702.1-201ENST00000563810 1770 ntBASIC16.98■□□□□ 0.31
SSSCA1O60232 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SSSCA1O60232 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SSSCA1O60232 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC16.98■□□□□ 0.31
SSSCA1O60232 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
SSSCA1O60232 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SSSCA1O60232 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
SSSCA1O60232 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms