Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
KDELR3O43731 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
KDELR3O43731 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.29■■□□□ 1
KDELR3O43731 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.29■■□□□ 1
KDELR3O43731 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.29■■□□□ 1
KDELR3O43731 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.29■■□□□ 1
KDELR3O43731 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.29■■□□□ 1
KDELR3O43731 RARRES2P11-201ENST00000635158 484 ntBASIC21.29■■□□□ 1
KDELR3O43731 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
KDELR3O43731 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.29■■□□□ 1
KDELR3O43731 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
KDELR3O43731 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KDELR3O43731 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.28■■□□□ 1
KDELR3O43731 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.28■■□□□ 1
KDELR3O43731 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.28■■□□□ 1
KDELR3O43731 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.28■■□□□ 1
KDELR3O43731 AC245052.3-201ENST00000450182 901 ntBASIC21.28■■□□□ 1
KDELR3O43731 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.28■■□□□ 1
KDELR3O43731 AC231657.2-201ENST00000624556 255 ntBASIC21.28■■□□□ 1
KDELR3O43731 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.28■■□□□ 1
KDELR3O43731 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KDELR3O43731 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KDELR3O43731 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KDELR3O43731 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KDELR3O43731 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
KDELR3O43731 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KDELR3O43731 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.28■■□□□ 1
KDELR3O43731 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.27■■□□□ 1
KDELR3O43731 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
KDELR3O43731 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.27■■□□□ 1
KDELR3O43731 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.27■■□□□ 1
KDELR3O43731 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
KDELR3O43731 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.27■■□□□ 1
KDELR3O43731 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.27■■□□□ 1
KDELR3O43731 CNN2P6-201ENST00000439038 900 ntBASIC21.27■■□□□ 1
KDELR3O43731 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.27■■□□□ 1
KDELR3O43731 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.27■■□□□ 1
KDELR3O43731 RAP2CP1-201ENST00000605103 478 ntBASIC21.27■■□□□ 1
KDELR3O43731 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
KDELR3O43731 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
KDELR3O43731 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
KDELR3O43731 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.27■■□□□ 1
KDELR3O43731 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
KDELR3O43731 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.27■■□□□ 1
KDELR3O43731 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
KDELR3O43731 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
KDELR3O43731 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.27■■□□□ 1
KDELR3O43731 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
KDELR3O43731 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
KDELR3O43731 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.26■□□□□ 0.99
KDELR3O43731 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
KDELR3O43731 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
KDELR3O43731 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KDELR3O43731 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
KDELR3O43731 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.26■□□□□ 0.99
KDELR3O43731 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
KDELR3O43731 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.26■□□□□ 0.99
KDELR3O43731 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
KDELR3O43731 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.26■□□□□ 0.99
KDELR3O43731 AC013268.1-206ENST00000638368 961 ntBASIC21.26■□□□□ 0.99
KDELR3O43731 AC112229.1-201ENST00000639295 961 ntBASIC21.26■□□□□ 0.99
KDELR3O43731 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KDELR3O43731 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
KDELR3O43731 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
KDELR3O43731 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.26■□□□□ 0.99
KDELR3O43731 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.25■□□□□ 0.99
KDELR3O43731 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
KDELR3O43731 AC026185.1-201ENST00000445748 174 ntBASIC21.25■□□□□ 0.99
KDELR3O43731 AC007322.4-201ENST00000509611 723 ntBASIC21.25■□□□□ 0.99
KDELR3O43731 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
KDELR3O43731 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
KDELR3O43731 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.25■□□□□ 0.99
KDELR3O43731 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.25■□□□□ 0.99
KDELR3O43731 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
KDELR3O43731 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
KDELR3O43731 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
KDELR3O43731 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.25■□□□□ 0.99
KDELR3O43731 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.24■□□□□ 0.99
KDELR3O43731 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KDELR3O43731 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
KDELR3O43731 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
KDELR3O43731 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
KDELR3O43731 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.24■□□□□ 0.99
KDELR3O43731 AC007322.1-201ENST00000426983 750 ntBASIC21.24■□□□□ 0.99
KDELR3O43731 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.24■□□□□ 0.99
KDELR3O43731 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.24■□□□□ 0.99
KDELR3O43731 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.24■□□□□ 0.99
KDELR3O43731 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.24■□□□□ 0.99
KDELR3O43731 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
KDELR3O43731 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KDELR3O43731 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
KDELR3O43731 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
KDELR3O43731 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
KDELR3O43731 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.23■□□□□ 0.99
KDELR3O43731 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KDELR3O43731 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
KDELR3O43731 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
KDELR3O43731 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
KDELR3O43731 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
KDELR3O43731 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms