Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
XRCC2O43543 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.13■□□□□ 0.49
XRCC2O43543 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.13■□□□□ 0.49
XRCC2O43543 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
XRCC2O43543 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
XRCC2O43543 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
XRCC2O43543 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
XRCC2O43543 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
XRCC2O43543 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
XRCC2O43543 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC18.13■□□□□ 0.49
XRCC2O43543 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.13■□□□□ 0.49
XRCC2O43543 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
XRCC2O43543 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
XRCC2O43543 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
XRCC2O43543 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
XRCC2O43543 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
XRCC2O43543 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.13■□□□□ 0.49
XRCC2O43543 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.13■□□□□ 0.49
XRCC2O43543 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
XRCC2O43543 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
XRCC2O43543 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
XRCC2O43543 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
XRCC2O43543 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
XRCC2O43543 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
XRCC2O43543 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
XRCC2O43543 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
XRCC2O43543 AC123595.1-201ENST00000440769 1046 ntBASIC18.12■□□□□ 0.49
XRCC2O43543 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
XRCC2O43543 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
XRCC2O43543 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
XRCC2O43543 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
XRCC2O43543 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
XRCC2O43543 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.11■□□□□ 0.49
XRCC2O43543 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
XRCC2O43543 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.11■□□□□ 0.49
XRCC2O43543 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.11■□□□□ 0.49
XRCC2O43543 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
XRCC2O43543 AC008175.2-201ENST00000612840 297 ntBASIC18.11■□□□□ 0.49
XRCC2O43543 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
XRCC2O43543 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
XRCC2O43543 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
XRCC2O43543 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
XRCC2O43543 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.11■□□□□ 0.49
XRCC2O43543 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
XRCC2O43543 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
XRCC2O43543 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
XRCC2O43543 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
XRCC2O43543 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.1■□□□□ 0.49
XRCC2O43543 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.1■□□□□ 0.49
XRCC2O43543 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
XRCC2O43543 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.1■□□□□ 0.49
XRCC2O43543 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
XRCC2O43543 YBX1P1-201ENST00000445822 960 ntBASIC18.1■□□□□ 0.49
XRCC2O43543 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.1■□□□□ 0.49
XRCC2O43543 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.1■□□□□ 0.49
XRCC2O43543 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.1■□□□□ 0.49
XRCC2O43543 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.1■□□□□ 0.49
XRCC2O43543 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.1■□□□□ 0.49
XRCC2O43543 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
XRCC2O43543 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
XRCC2O43543 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
XRCC2O43543 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.1■□□□□ 0.49
XRCC2O43543 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
XRCC2O43543 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
XRCC2O43543 POU5F1P4-201ENST00000413175 1085 ntBASIC18.09■□□□□ 0.49
XRCC2O43543 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
XRCC2O43543 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.09■□□□□ 0.49
XRCC2O43543 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.09■□□□□ 0.49
XRCC2O43543 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
XRCC2O43543 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
XRCC2O43543 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
XRCC2O43543 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
XRCC2O43543 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
XRCC2O43543 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.09■□□□□ 0.49
XRCC2O43543 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.08■□□□□ 0.49
XRCC2O43543 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
XRCC2O43543 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
XRCC2O43543 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.08■□□□□ 0.49
XRCC2O43543 AP004607.4-201ENST00000530158 1459 ntBASIC18.08■□□□□ 0.49
XRCC2O43543 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
XRCC2O43543 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
XRCC2O43543 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
XRCC2O43543 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.08■□□□□ 0.49
XRCC2O43543 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.08■□□□□ 0.48
XRCC2O43543 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
XRCC2O43543 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
XRCC2O43543 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.08■□□□□ 0.48
XRCC2O43543 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.08■□□□□ 0.48
XRCC2O43543 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
XRCC2O43543 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.08■□□□□ 0.48
XRCC2O43543 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
XRCC2O43543 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.08■□□□□ 0.48
XRCC2O43543 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
XRCC2O43543 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
XRCC2O43543 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
XRCC2O43543 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
XRCC2O43543 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
XRCC2O43543 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.08■□□□□ 0.48
XRCC2O43543 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
XRCC2O43543 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms