Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SMAD6O43541 AC007322.4-201ENST00000509611 723 ntBASIC21.22■□□□□ 0.99
SMAD6O43541 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
SMAD6O43541 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
SMAD6O43541 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
SMAD6O43541 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.22■□□□□ 0.99
SMAD6O43541 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
SMAD6O43541 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SMAD6O43541 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMAD6O43541 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SMAD6O43541 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMAD6O43541 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMAD6O43541 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMAD6O43541 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMAD6O43541 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.21■□□□□ 0.99
SMAD6O43541 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMAD6O43541 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMAD6O43541 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.21■□□□□ 0.99
SMAD6O43541 AC243732.1-201ENST00000612648 864 ntBASIC21.21■□□□□ 0.99
SMAD6O43541 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SMAD6O43541 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMAD6O43541 AC244015.2-201ENST00000616358 1861 ntBASIC21.21■□□□□ 0.99
SMAD6O43541 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMAD6O43541 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMAD6O43541 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SMAD6O43541 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SMAD6O43541 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
SMAD6O43541 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
SMAD6O43541 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.2■□□□□ 0.98
SMAD6O43541 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMAD6O43541 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMAD6O43541 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
SMAD6O43541 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
SMAD6O43541 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
SMAD6O43541 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMAD6O43541 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
SMAD6O43541 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
SMAD6O43541 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.2■□□□□ 0.98
SMAD6O43541 AC083906.2-201ENST00000511578 360 ntBASIC21.2■□□□□ 0.98
SMAD6O43541 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMAD6O43541 AC104771.1-201ENST00000603335 964 ntBASIC21.2■□□□□ 0.98
SMAD6O43541 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMAD6O43541 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMAD6O43541 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SMAD6O43541 AC079834.2-201ENST00000609776 1949 ntBASIC21.19■□□□□ 0.98
SMAD6O43541 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SMAD6O43541 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
SMAD6O43541 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.19■□□□□ 0.98
SMAD6O43541 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMAD6O43541 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SMAD6O43541 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMAD6O43541 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMAD6O43541 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.19■□□□□ 0.98
SMAD6O43541 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.19■□□□□ 0.98
SMAD6O43541 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
SMAD6O43541 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMAD6O43541 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMAD6O43541 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.19■□□□□ 0.98
SMAD6O43541 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMAD6O43541 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SMAD6O43541 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMAD6O43541 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMAD6O43541 LINC00565-201ENST00000562710 2331 ntBASIC21.18■□□□□ 0.98
SMAD6O43541 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SMAD6O43541 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.18■□□□□ 0.98
SMAD6O43541 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.18■□□□□ 0.98
SMAD6O43541 GPX1P1-201ENST00000388829 606 ntBASIC21.18■□□□□ 0.98
SMAD6O43541 CYP2T1P-201ENST00000432607 1285 ntBASIC21.18■□□□□ 0.98
SMAD6O43541 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.18■□□□□ 0.98
SMAD6O43541 AL109923.1-201ENST00000618799 583 ntBASIC21.18■□□□□ 0.98
SMAD6O43541 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.18■□□□□ 0.98
SMAD6O43541 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SMAD6O43541 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SMAD6O43541 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.18■□□□□ 0.98
SMAD6O43541 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.18■□□□□ 0.98
SMAD6O43541 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
SMAD6O43541 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
SMAD6O43541 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.17■□□□□ 0.98
SMAD6O43541 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SMAD6O43541 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMAD6O43541 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMAD6O43541 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SMAD6O43541 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMAD6O43541 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SMAD6O43541 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
SMAD6O43541 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.17■□□□□ 0.98
SMAD6O43541 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMAD6O43541 AL121832.2-201ENST00000610979 668 ntBASIC21.17■□□□□ 0.98
SMAD6O43541 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.17■□□□□ 0.98
SMAD6O43541 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SMAD6O43541 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SMAD6O43541 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SMAD6O43541 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.16■□□□□ 0.98
SMAD6O43541 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMAD6O43541 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMAD6O43541 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.16■□□□□ 0.98
SMAD6O43541 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.16■□□□□ 0.98
SMAD6O43541 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SMAD6O43541 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.16■□□□□ 0.98
SMAD6O43541 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms