Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.85■□□□□ 0.77
CASQ2O14958 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CASQ2O14958 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CASQ2O14958 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.85■□□□□ 0.77
CASQ2O14958 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CASQ2O14958 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.85■□□□□ 0.77
CASQ2O14958 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.85■□□□□ 0.77
CASQ2O14958 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CASQ2O14958 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CASQ2O14958 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CASQ2O14958 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CASQ2O14958 PLK5-205ENST00000642079 1969 ntBASIC19.84■□□□□ 0.77
CASQ2O14958 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CASQ2O14958 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CASQ2O14958 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CASQ2O14958 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.84■□□□□ 0.77
CASQ2O14958 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CASQ2O14958 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CASQ2O14958 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CASQ2O14958 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.84■□□□□ 0.77
CASQ2O14958 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CASQ2O14958 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.84■□□□□ 0.77
CASQ2O14958 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.84■□□□□ 0.77
CASQ2O14958 THA1P-201ENST00000590384 1145 ntBASIC19.84■□□□□ 0.77
CASQ2O14958 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.84■□□□□ 0.77
CASQ2O14958 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CASQ2O14958 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CASQ2O14958 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.84■□□□□ 0.77
CASQ2O14958 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CASQ2O14958 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CASQ2O14958 AC020907.5-201ENST00000624372 1936 ntBASIC19.84■□□□□ 0.77
CASQ2O14958 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CASQ2O14958 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.84■□□□□ 0.77
CASQ2O14958 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.84■□□□□ 0.77
CASQ2O14958 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.84■□□□□ 0.77
CASQ2O14958 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.83■□□□□ 0.77
CASQ2O14958 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CASQ2O14958 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CASQ2O14958 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
CASQ2O14958 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CASQ2O14958 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.83■□□□□ 0.77
CASQ2O14958 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CASQ2O14958 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.83■□□□□ 0.77
CASQ2O14958 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CASQ2O14958 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CASQ2O14958 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CASQ2O14958 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
CASQ2O14958 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CASQ2O14958 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.76
CASQ2O14958 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.83■□□□□ 0.76
CASQ2O14958 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CASQ2O14958 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CASQ2O14958 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
CASQ2O14958 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CASQ2O14958 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
CASQ2O14958 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
CASQ2O14958 AL162377.1-201ENST00000618844 1793 ntBASIC19.83■□□□□ 0.76
CASQ2O14958 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CASQ2O14958 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
CASQ2O14958 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.82■□□□□ 0.76
CASQ2O14958 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.82■□□□□ 0.76
CASQ2O14958 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CASQ2O14958 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CASQ2O14958 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.82■□□□□ 0.76
CASQ2O14958 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CASQ2O14958 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.82■□□□□ 0.76
CASQ2O14958 AC079089.2-201ENST00000531211 1277 ntBASIC19.82■□□□□ 0.76
CASQ2O14958 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CASQ2O14958 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.82■□□□□ 0.76
CASQ2O14958 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CASQ2O14958 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.82■□□□□ 0.76
CASQ2O14958 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CASQ2O14958 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.82■□□□□ 0.76
CASQ2O14958 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CASQ2O14958 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.82■□□□□ 0.76
CASQ2O14958 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CASQ2O14958 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CASQ2O14958 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CASQ2O14958 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CASQ2O14958 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.81■□□□□ 0.76
CASQ2O14958 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CASQ2O14958 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CASQ2O14958 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CASQ2O14958 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CASQ2O14958 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CASQ2O14958 ABHD17AP4-201ENST00000411545 909 ntBASIC19.81■□□□□ 0.76
CASQ2O14958 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CASQ2O14958 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CASQ2O14958 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CASQ2O14958 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CASQ2O14958 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CASQ2O14958 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CASQ2O14958 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
CASQ2O14958 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CASQ2O14958 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CASQ2O14958 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CASQ2O14958 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CASQ2O14958 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CASQ2O14958 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.8■□□□□ 0.76
CASQ2O14958 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms