Protein–RNA interactions for Protein: O00241

SIRPB1, Signal-regulatory protein beta-1, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1O00241 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SIRPB1O00241 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.64■□□□□ 0.42
SIRPB1O00241 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SIRPB1O00241 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SIRPB1O00241 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
SIRPB1O00241 RARG-204ENST00000543726 1779 ntTSL 2 BASIC17.64■□□□□ 0.41
SIRPB1O00241 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
SIRPB1O00241 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SIRPB1O00241 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SIRPB1O00241 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SIRPB1O00241 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SIRPB1O00241 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SIRPB1O00241 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.64■□□□□ 0.41
SIRPB1O00241 TPRG1LP1-201ENST00000598702 760 ntBASIC17.64■□□□□ 0.41
SIRPB1O00241 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SIRPB1O00241 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SIRPB1O00241 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SIRPB1O00241 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SIRPB1O00241 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SIRPB1O00241 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SIRPB1O00241 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.64■□□□□ 0.41
SIRPB1O00241 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.63■□□□□ 0.41
SIRPB1O00241 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SIRPB1O00241 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SIRPB1O00241 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SIRPB1O00241 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SIRPB1O00241 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SIRPB1O00241 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SIRPB1O00241 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SIRPB1O00241 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SIRPB1O00241 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
SIRPB1O00241 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SIRPB1O00241 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SIRPB1O00241 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.63■□□□□ 0.41
SIRPB1O00241 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SIRPB1O00241 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.63■□□□□ 0.41
SIRPB1O00241 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SIRPB1O00241 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SIRPB1O00241 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.63■□□□□ 0.41
SIRPB1O00241 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.62■□□□□ 0.41
SIRPB1O00241 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SIRPB1O00241 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
SIRPB1O00241 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SIRPB1O00241 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SIRPB1O00241 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.62■□□□□ 0.41
SIRPB1O00241 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SIRPB1O00241 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
SIRPB1O00241 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SIRPB1O00241 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
SIRPB1O00241 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SIRPB1O00241 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SIRPB1O00241 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.62■□□□□ 0.41
SIRPB1O00241 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.62■□□□□ 0.41
SIRPB1O00241 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SIRPB1O00241 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.62■□□□□ 0.41
SIRPB1O00241 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.62■□□□□ 0.41
SIRPB1O00241 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.61■□□□□ 0.41
SIRPB1O00241 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SIRPB1O00241 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SIRPB1O00241 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SIRPB1O00241 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SIRPB1O00241 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SIRPB1O00241 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SIRPB1O00241 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.61■□□□□ 0.41
SIRPB1O00241 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SIRPB1O00241 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SIRPB1O00241 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC17.61■□□□□ 0.41
SIRPB1O00241 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC17.61■□□□□ 0.41
SIRPB1O00241 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC17.61■□□□□ 0.41
SIRPB1O00241 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.61■□□□□ 0.41
SIRPB1O00241 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SIRPB1O00241 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SIRPB1O00241 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
SIRPB1O00241 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SIRPB1O00241 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.61■□□□□ 0.41
SIRPB1O00241 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
SIRPB1O00241 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
SIRPB1O00241 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SIRPB1O00241 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SIRPB1O00241 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SIRPB1O00241 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SIRPB1O00241 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.6■□□□□ 0.41
SIRPB1O00241 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SIRPB1O00241 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SIRPB1O00241 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SIRPB1O00241 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SIRPB1O00241 AC079140.4-201ENST00000507448 529 ntBASIC17.6■□□□□ 0.41
SIRPB1O00241 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SIRPB1O00241 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.6■□□□□ 0.41
SIRPB1O00241 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SIRPB1O00241 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SIRPB1O00241 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SIRPB1O00241 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SIRPB1O00241 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SIRPB1O00241 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SIRPB1O00241 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
SIRPB1O00241 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SIRPB1O00241 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.59■□□□□ 0.41
SIRPB1O00241 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SIRPB1O00241 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms