Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC188H7C350 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC188H7C350 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC188H7C350 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC188H7C350 AC007952.6-201ENST00000573168 2673 ntBASIC21.73■■□□□ 1.07
CCDC188H7C350 AC003957.1-201ENST00000625108 2673 ntBASIC21.73■■□□□ 1.07
CCDC188H7C350 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC188H7C350 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC188H7C350 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.72■■□□□ 1.07
CCDC188H7C350 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC188H7C350 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC188H7C350 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC188H7C350 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC188H7C350 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.72■■□□□ 1.07
CCDC188H7C350 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC188H7C350 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.72■■□□□ 1.07
CCDC188H7C350 AC011298.3-201ENST00000615796 283 ntBASIC21.72■■□□□ 1.07
CCDC188H7C350 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CCDC188H7C350 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.72■■□□□ 1.07
CCDC188H7C350 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC188H7C350 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC188H7C350 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
CCDC188H7C350 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC188H7C350 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC188H7C350 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC188H7C350 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC188H7C350 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CCDC188H7C350 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC188H7C350 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC188H7C350 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
CCDC188H7C350 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
CCDC188H7C350 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC21.71■■□□□ 1.07
CCDC188H7C350 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC188H7C350 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC188H7C350 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.71■■□□□ 1.07
CCDC188H7C350 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
CCDC188H7C350 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC188H7C350 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC188H7C350 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.7■■□□□ 1.06
CCDC188H7C350 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC188H7C350 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC188H7C350 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC188H7C350 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC188H7C350 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC188H7C350 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.7■■□□□ 1.06
CCDC188H7C350 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.7■■□□□ 1.06
CCDC188H7C350 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.7■■□□□ 1.06
CCDC188H7C350 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.7■■□□□ 1.06
CCDC188H7C350 SMUG1P1-201ENST00000590640 811 ntBASIC21.7■■□□□ 1.06
CCDC188H7C350 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.7■■□□□ 1.06
CCDC188H7C350 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC188H7C350 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC188H7C350 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC188H7C350 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.7■■□□□ 1.06
CCDC188H7C350 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC188H7C350 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CCDC188H7C350 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.7■■□□□ 1.06
CCDC188H7C350 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC188H7C350 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC188H7C350 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC188H7C350 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.69■■□□□ 1.06
CCDC188H7C350 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.69■■□□□ 1.06
CCDC188H7C350 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC188H7C350 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC188H7C350 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.69■■□□□ 1.06
CCDC188H7C350 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
CCDC188H7C350 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CCDC188H7C350 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
CCDC188H7C350 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC188H7C350 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC188H7C350 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.69■■□□□ 1.06
CCDC188H7C350 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
CCDC188H7C350 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC188H7C350 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.69■■□□□ 1.06
CCDC188H7C350 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.69■■□□□ 1.06
CCDC188H7C350 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC188H7C350 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC188H7C350 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC188H7C350 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.69■■□□□ 1.06
CCDC188H7C350 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.69■■□□□ 1.06
CCDC188H7C350 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.69■■□□□ 1.06
CCDC188H7C350 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
CCDC188H7C350 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
CCDC188H7C350 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.68■■□□□ 1.06
CCDC188H7C350 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC188H7C350 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC188H7C350 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC188H7C350 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC188H7C350 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CCDC188H7C350 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC188H7C350 AL391422.3-201ENST00000603791 2761 ntBASIC21.68■■□□□ 1.06
CCDC188H7C350 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC188H7C350 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC188H7C350 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CCDC188H7C350 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC188H7C350 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CCDC188H7C350 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC188H7C350 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
CCDC188H7C350 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC188H7C350 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms