Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SRRM3A6NNA2 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.58■■□□□ 1.05
SRRM3A6NNA2 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.58■■□□□ 1.05
SRRM3A6NNA2 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
SRRM3A6NNA2 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.58■■□□□ 1.05
SRRM3A6NNA2 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.58■■□□□ 1.05
SRRM3A6NNA2 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SRRM3A6NNA2 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.58■■□□□ 1.05
SRRM3A6NNA2 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.58■■□□□ 1.05
SRRM3A6NNA2 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.58■■□□□ 1.05
SRRM3A6NNA2 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.58■■□□□ 1.05
SRRM3A6NNA2 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21.58■■□□□ 1.05
SRRM3A6NNA2 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SRRM3A6NNA2 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
SRRM3A6NNA2 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
SRRM3A6NNA2 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.58■■□□□ 1.04
SRRM3A6NNA2 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SRRM3A6NNA2 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SRRM3A6NNA2 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
SRRM3A6NNA2 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SRRM3A6NNA2 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
SRRM3A6NNA2 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.57■■□□□ 1.04
SRRM3A6NNA2 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.57■■□□□ 1.04
SRRM3A6NNA2 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SRRM3A6NNA2 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
SRRM3A6NNA2 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
SRRM3A6NNA2 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
SRRM3A6NNA2 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.57■■□□□ 1.04
SRRM3A6NNA2 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.57■■□□□ 1.04
SRRM3A6NNA2 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SRRM3A6NNA2 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.57■■□□□ 1.04
SRRM3A6NNA2 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.57■■□□□ 1.04
SRRM3A6NNA2 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.56■■□□□ 1.04
SRRM3A6NNA2 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SRRM3A6NNA2 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SRRM3A6NNA2 AC006015.1-201ENST00000429970 570 ntBASIC21.56■■□□□ 1.04
SRRM3A6NNA2 AC026185.1-201ENST00000445748 174 ntBASIC21.56■■□□□ 1.04
SRRM3A6NNA2 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.56■■□□□ 1.04
SRRM3A6NNA2 TERF1P2-201ENST00000583350 1212 ntBASIC21.56■■□□□ 1.04
SRRM3A6NNA2 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
SRRM3A6NNA2 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
SRRM3A6NNA2 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
SRRM3A6NNA2 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
SRRM3A6NNA2 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
SRRM3A6NNA2 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.55■■□□□ 1.04
SRRM3A6NNA2 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SRRM3A6NNA2 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.55■■□□□ 1.04
SRRM3A6NNA2 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.55■■□□□ 1.04
SRRM3A6NNA2 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
SRRM3A6NNA2 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
SRRM3A6NNA2 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SRRM3A6NNA2 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.55■■□□□ 1.04
SRRM3A6NNA2 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SRRM3A6NNA2 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.55■■□□□ 1.04
SRRM3A6NNA2 AC012414.1-201ENST00000556676 535 ntBASIC21.55■■□□□ 1.04
SRRM3A6NNA2 AC241377.3-202ENST00000626088 1088 ntBASIC21.55■■□□□ 1.04
SRRM3A6NNA2 AC241585.3-202ENST00000628937 1088 ntBASIC21.55■■□□□ 1.04
SRRM3A6NNA2 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.55■■□□□ 1.04
SRRM3A6NNA2 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SRRM3A6NNA2 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.55■■□□□ 1.04
SRRM3A6NNA2 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SRRM3A6NNA2 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.55■■□□□ 1.04
SRRM3A6NNA2 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SRRM3A6NNA2 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.54■■□□□ 1.04
SRRM3A6NNA2 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SRRM3A6NNA2 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.54■■□□□ 1.04
SRRM3A6NNA2 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SRRM3A6NNA2 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SRRM3A6NNA2 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.54■■□□□ 1.04
SRRM3A6NNA2 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
SRRM3A6NNA2 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
SRRM3A6NNA2 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.54■■□□□ 1.04
SRRM3A6NNA2 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
SRRM3A6NNA2 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.54■■□□□ 1.04
SRRM3A6NNA2 ARL16-209ENST00000573715 763 ntTSL 3 BASIC21.54■■□□□ 1.04
SRRM3A6NNA2 ARL16-211ENST00000576135 694 ntTSL 3 BASIC21.54■■□□□ 1.04
SRRM3A6NNA2 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SRRM3A6NNA2 AL499627.2-201ENST00000606283 725 ntBASIC21.54■■□□□ 1.04
SRRM3A6NNA2 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
SRRM3A6NNA2 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SRRM3A6NNA2 AP005212.1-201ENST00000581547 1997 ntBASIC21.54■■□□□ 1.04
SRRM3A6NNA2 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SRRM3A6NNA2 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SRRM3A6NNA2 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.53■■□□□ 1.04
SRRM3A6NNA2 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SRRM3A6NNA2 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.53■■□□□ 1.04
SRRM3A6NNA2 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SRRM3A6NNA2 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SRRM3A6NNA2 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SRRM3A6NNA2 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.53■■□□□ 1.04
SRRM3A6NNA2 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.53■■□□□ 1.04
SRRM3A6NNA2 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.53■■□□□ 1.04
SRRM3A6NNA2 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.53■■□□□ 1.04
SRRM3A6NNA2 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SRRM3A6NNA2 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SRRM3A6NNA2 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.53■■□□□ 1.04
SRRM3A6NNA2 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.53■■□□□ 1.04
SRRM3A6NNA2 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SRRM3A6NNA2 AC093827.2-201ENST00000512654 315 ntBASIC21.53■■□□□ 1.04
SRRM3A6NNA2 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms