Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRBV5-3A0A0A0MS03 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.64■□□□□ 0.73
TRBV5-3A0A0A0MS03 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
TRBV5-3A0A0A0MS03 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRBV5-3A0A0A0MS03 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
TRBV5-3A0A0A0MS03 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRBV5-3A0A0A0MS03 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.63■□□□□ 0.73
TRBV5-3A0A0A0MS03 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRBV5-3A0A0A0MS03 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRBV5-3A0A0A0MS03 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRBV5-3A0A0A0MS03 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRBV5-3A0A0A0MS03 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRBV5-3A0A0A0MS03 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.63■□□□□ 0.73
TRBV5-3A0A0A0MS03 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.63■□□□□ 0.73
TRBV5-3A0A0A0MS03 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.63■□□□□ 0.73
TRBV5-3A0A0A0MS03 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.63■□□□□ 0.73
TRBV5-3A0A0A0MS03 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.63■□□□□ 0.73
TRBV5-3A0A0A0MS03 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.63■□□□□ 0.73
TRBV5-3A0A0A0MS03 AL136162.1-201ENST00000607711 1078 ntBASIC19.63■□□□□ 0.73
TRBV5-3A0A0A0MS03 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRBV5-3A0A0A0MS03 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
TRBV5-3A0A0A0MS03 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
TRBV5-3A0A0A0MS03 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
TRBV5-3A0A0A0MS03 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.62■□□□□ 0.73
TRBV5-3A0A0A0MS03 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.62■□□□□ 0.73
TRBV5-3A0A0A0MS03 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.62■□□□□ 0.73
TRBV5-3A0A0A0MS03 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
TRBV5-3A0A0A0MS03 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRBV5-3A0A0A0MS03 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.62■□□□□ 0.73
TRBV5-3A0A0A0MS03 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.62■□□□□ 0.73
TRBV5-3A0A0A0MS03 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.62■□□□□ 0.73
TRBV5-3A0A0A0MS03 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.62■□□□□ 0.73
TRBV5-3A0A0A0MS03 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRBV5-3A0A0A0MS03 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRBV5-3A0A0A0MS03 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.62■□□□□ 0.73
TRBV5-3A0A0A0MS03 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
TRBV5-3A0A0A0MS03 AL162377.1-201ENST00000618844 1793 ntBASIC19.62■□□□□ 0.73
TRBV5-3A0A0A0MS03 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRBV5-3A0A0A0MS03 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRBV5-3A0A0A0MS03 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.62■□□□□ 0.73
TRBV5-3A0A0A0MS03 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
TRBV5-3A0A0A0MS03 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV5-3A0A0A0MS03 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.61■□□□□ 0.73
TRBV5-3A0A0A0MS03 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TRBV5-3A0A0A0MS03 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV5-3A0A0A0MS03 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV5-3A0A0A0MS03 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV5-3A0A0A0MS03 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV5-3A0A0A0MS03 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.61■□□□□ 0.73
TRBV5-3A0A0A0MS03 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.61■□□□□ 0.73
TRBV5-3A0A0A0MS03 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TRBV5-3A0A0A0MS03 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.61■□□□□ 0.73
TRBV5-3A0A0A0MS03 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.61■□□□□ 0.73
TRBV5-3A0A0A0MS03 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.61■□□□□ 0.73
TRBV5-3A0A0A0MS03 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TRBV5-3A0A0A0MS03 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV5-3A0A0A0MS03 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.61■□□□□ 0.73
TRBV5-3A0A0A0MS03 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.61■□□□□ 0.73
TRBV5-3A0A0A0MS03 AC105233.4-201ENST00000642045 216 ntBASIC19.61■□□□□ 0.73
TRBV5-3A0A0A0MS03 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV5-3A0A0A0MS03 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRBV5-3A0A0A0MS03 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TRBV5-3A0A0A0MS03 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.61■□□□□ 0.73
TRBV5-3A0A0A0MS03 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRBV5-3A0A0A0MS03 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.6■□□□□ 0.73
TRBV5-3A0A0A0MS03 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRBV5-3A0A0A0MS03 AC135279.3-201ENST00000610945 1311 ntBASIC19.6■□□□□ 0.73
TRBV5-3A0A0A0MS03 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRBV5-3A0A0A0MS03 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.6■□□□□ 0.73
TRBV5-3A0A0A0MS03 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.6■□□□□ 0.73
TRBV5-3A0A0A0MS03 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRBV5-3A0A0A0MS03 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.6■□□□□ 0.73
TRBV5-3A0A0A0MS03 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRBV5-3A0A0A0MS03 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRBV5-3A0A0A0MS03 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
TRBV5-3A0A0A0MS03 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRBV5-3A0A0A0MS03 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
TRBV5-3A0A0A0MS03 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRBV5-3A0A0A0MS03 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
TRBV5-3A0A0A0MS03 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRBV5-3A0A0A0MS03 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV5-3A0A0A0MS03 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
TRBV5-3A0A0A0MS03 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.59■□□□□ 0.73
TRBV5-3A0A0A0MS03 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.59■□□□□ 0.73
TRBV5-3A0A0A0MS03 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV5-3A0A0A0MS03 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.59■□□□□ 0.73
TRBV5-3A0A0A0MS03 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV5-3A0A0A0MS03 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV5-3A0A0A0MS03 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV5-3A0A0A0MS03 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
TRBV5-3A0A0A0MS03 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRBV5-3A0A0A0MS03 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.59■□□□□ 0.73
TRBV5-3A0A0A0MS03 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.59■□□□□ 0.73
TRBV5-3A0A0A0MS03 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.59■□□□□ 0.73
TRBV5-3A0A0A0MS03 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.59■□□□□ 0.73
TRBV5-3A0A0A0MS03 EEF1DP3-203ENST00000566025 782 ntBASIC19.59■□□□□ 0.73
TRBV5-3A0A0A0MS03 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
TRBV5-3A0A0A0MS03 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.59■□□□□ 0.73
TRBV5-3A0A0A0MS03 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.59■□□□□ 0.73
TRBV5-3A0A0A0MS03 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms