Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 SPATA19-202ENST00000532889 653 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
SYCE2Q6PIF2 LINC00609-201ENST00000546508 583 ntTSL 3 BASIC10.84□□□□□ -0.67
SYCE2Q6PIF2 TP53TG3D-207ENST00000569631 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
SYCE2Q6PIF2 AC093484.3-201ENST00000578296 449 ntBASIC10.84□□□□□ -0.67
SYCE2Q6PIF2 AC005828.2-201ENST00000580253 562 ntTSL 4 BASIC10.84□□□□□ -0.67
SYCE2Q6PIF2 AC016629.3-202ENST00000596427 890 ntTSL 2 BASIC10.84□□□□□ -0.67
SYCE2Q6PIF2 AC013400.1-201ENST00000607190 545 ntBASIC10.84□□□□□ -0.67
SYCE2Q6PIF2 AC253536.6-201ENST00000609736 663 ntBASIC10.84□□□□□ -0.67
SYCE2Q6PIF2 Metazoa_SRP.164-201ENST00000620748 331 ntBASIC10.84□□□□□ -0.67
SYCE2Q6PIF2 AC025268.1-201ENST00000632192 1199 ntBASIC10.84□□□□□ -0.67
SYCE2Q6PIF2 AC093390.2-202ENST00000638236 976 ntTSL 5 BASIC10.84□□□□□ -0.67
SYCE2Q6PIF2 CELF2-201ENST00000354897 1754 ntTSL 5 BASIC10.84□□□□□ -0.67
SYCE2Q6PIF2 ATP11A-212ENST00000487903 8858 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
SYCE2Q6PIF2 LINC01516-201ENST00000436140 2992 ntTSL 5 BASIC10.84□□□□□ -0.67
SYCE2Q6PIF2 SLC25A25-202ENST00000373066 3714 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SYCE2Q6PIF2 PNPLA8-203ENST00000422087 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SYCE2Q6PIF2 GRIK1-205ENST00000399909 3427 ntTSL 5 BASIC10.84□□□□□ -0.67
SYCE2Q6PIF2 STX17-201ENST00000259400 2713 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
SYCE2Q6PIF2 RCC1-204ENST00000398958 2715 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
SYCE2Q6PIF2 DCAF4L1-201ENST00000333141 4772 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
SYCE2Q6PIF2 FN1-204ENST00000356005 7846 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SYCE2Q6PIF2 AC142384.1-201ENST00000566346 1549 ntBASIC10.84□□□□□ -0.67
SYCE2Q6PIF2 AC005692.1-201ENST00000461145 1439 ntTSL 5 BASIC10.84□□□□□ -0.67
SYCE2Q6PIF2 VWA5B1-202ENST00000375079 3859 ntAPPRIS P5 TSL 5 BASIC10.84□□□□□ -0.67
SYCE2Q6PIF2 HM13-204ENST00000398174 3792 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
SYCE2Q6PIF2 TMEM178B-202ENST00000565468 10558 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
SYCE2Q6PIF2 TMEM178B-203ENST00000610315 10552 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
SYCE2Q6PIF2 ZNF185-209ENST00000449285 4328 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
SYCE2Q6PIF2 NFIA-207ENST00000403491 9487 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SYCE2Q6PIF2 RPS6KA2-206ENST00000503859 4137 ntTSL 2 BASIC10.83□□□□□ -0.68
SYCE2Q6PIF2 NXF1-211ENST00000531709 4128 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SYCE2Q6PIF2 FMN1-201ENST00000320930 3930 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SYCE2Q6PIF2 PLEC-206ENST00000357649 14689 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
SYCE2Q6PIF2 KLK10-201ENST00000309958 3111 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SYCE2Q6PIF2 CFAP69-213ENST00000497910 3032 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
SYCE2Q6PIF2 THUMPD1-202ENST00000396083 2624 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SYCE2Q6PIF2 CHMP2B-203ENST00000471660 2528 ntTSL 2 BASIC10.83□□□□□ -0.68
SYCE2Q6PIF2 TMEM69-201ENST00000372025 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SYCE2Q6PIF2 DHX35-202ENST00000373323 2347 ntTSL 2 BASIC10.83□□□□□ -0.68
SYCE2Q6PIF2 BCOR-204ENST00000378463 2230 ntTSL 5 BASIC10.83□□□□□ -0.68
SYCE2Q6PIF2 RPL26L1-201ENST00000265100 722 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SYCE2Q6PIF2 ETFRF1-201ENST00000381356 1134 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
SYCE2Q6PIF2 KRTAP4-3-201ENST00000391356 964 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
SYCE2Q6PIF2 SPACA3-203ENST00000394638 508 ntTSL 3 BASIC10.83□□□□□ -0.68
SYCE2Q6PIF2 RFPL3-202ENST00000397468 1214 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SYCE2Q6PIF2 AC064847.1-201ENST00000403125 506 ntBASIC10.83□□□□□ -0.68
SYCE2Q6PIF2 AC010998.1-201ENST00000414774 943 ntTSL 3 BASIC10.83□□□□□ -0.68
SYCE2Q6PIF2 AC017053.1-201ENST00000425125 579 ntTSL 4 BASIC10.83□□□□□ -0.68
SYCE2Q6PIF2 AC007253.1-201ENST00000425555 889 ntBASIC10.83□□□□□ -0.68
SYCE2Q6PIF2 FARP1-AS1-201ENST00000432229 323 ntTSL 3 BASIC10.83□□□□□ -0.68
SYCE2Q6PIF2 ZMIZ2-205ENST00000433667 3800 ntTSL 5 BASIC10.83□□□□□ -0.68
SYCE2Q6PIF2 CDCA4P1-201ENST00000442667 624 ntBASIC10.83□□□□□ -0.68
SYCE2Q6PIF2 PRSS1-204ENST00000486171 803 ntTSL 5 BASIC10.83□□□□□ -0.68
SYCE2Q6PIF2 AC055748.1-201ENST00000489836 959 ntBASIC10.83□□□□□ -0.68
SYCE2Q6PIF2 RN7SL384P-201ENST00000490382 298 ntBASIC10.83□□□□□ -0.68
SYCE2Q6PIF2 CCDC169-210ENST00000491049 753 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SYCE2Q6PIF2 AC073111.1-201ENST00000497366 420 ntTSL 3 BASIC10.83□□□□□ -0.68
SYCE2Q6PIF2 LYRM2-204ENST00000520441 791 ntTSL 3 BASIC10.83□□□□□ -0.68
SYCE2Q6PIF2 RPL26L1-206ENST00000521476 742 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
SYCE2Q6PIF2 AC087664.3-201ENST00000524110 328 ntBASIC10.83□□□□□ -0.68
SYCE2Q6PIF2 KRT18P59-201ENST00000524879 1231 ntBASIC10.83□□□□□ -0.68
SYCE2Q6PIF2 TRAPPC4-206ENST00000525303 654 ntTSL 2 BASIC10.83□□□□□ -0.68
SYCE2Q6PIF2 ADSSL1-210ENST00000556623 652 ntTSL 3 BASIC10.83□□□□□ -0.68
SYCE2Q6PIF2 C14orf166-206ENST00000556760 851 ntTSL 5 BASIC10.83□□□□□ -0.68
SYCE2Q6PIF2 AC133561.3-201ENST00000568778 351 ntBASIC10.83□□□□□ -0.68
SYCE2Q6PIF2 RN7SL493P-201ENST00000580401 299 ntBASIC10.83□□□□□ -0.68
SYCE2Q6PIF2 LRRC75A-AS1-223ENST00000581361 843 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SYCE2Q6PIF2 TSPAN16-205ENST00000592955 927 ntTSL 3 BASIC10.83□□□□□ -0.68
SYCE2Q6PIF2 AC010615.4-201ENST00000600810 472 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
SYCE2Q6PIF2 Z73429.1-201ENST00000610170 345 ntBASIC10.83□□□□□ -0.68
SYCE2Q6PIF2 Metazoa_SRP.205-201ENST00000620071 267 ntBASIC10.83□□□□□ -0.68
SYCE2Q6PIF2 AL353649.1-201ENST00000625060 619 ntBASIC10.83□□□□□ -0.68
SYCE2Q6PIF2 CLN3-244ENST00000636147 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SYCE2Q6PIF2 ATP2B2-204ENST00000397077 8964 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SYCE2Q6PIF2 TCF4-222ENST00000564228 1915 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
SYCE2Q6PIF2 TECPR2-201ENST00000359520 8686 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SYCE2Q6PIF2 ABLIM1-204ENST00000369256 3203 ntTSL 5 BASIC10.83□□□□□ -0.68
SYCE2Q6PIF2 SZT2-209ENST00000562955 13968 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
SYCE2Q6PIF2 FXR1-201ENST00000305586 3277 ntTSL 5 BASIC10.83□□□□□ -0.68
SYCE2Q6PIF2 KCNMA1-240ENST00000638575 3720 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
SYCE2Q6PIF2 KCNMA1-245ENST00000638759 3723 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
SYCE2Q6PIF2 KCNMA1-264ENST00000639544 3711 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
SYCE2Q6PIF2 CLU-201ENST00000316403 3080 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
SYCE2Q6PIF2 RBMY1E-202ENST00000382658 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
SYCE2Q6PIF2 ATP8B3-203ENST00000526092 2759 ntTSL 2 BASIC10.82□□□□□ -0.68
SYCE2Q6PIF2 ARMC2-202ENST00000368972 3663 ntTSL 2 BASIC10.82□□□□□ -0.68
SYCE2Q6PIF2 CASP3-201ENST00000308394 2673 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SYCE2Q6PIF2 SEMA4G-205ENST00000517724 2675 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SYCE2Q6PIF2 RASGRP4-220ENST00000622174 2651 ntTSL 5 BASIC10.82□□□□□ -0.68
SYCE2Q6PIF2 EDNRB-202ENST00000377211 4471 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SYCE2Q6PIF2 AMPD2-202ENST00000342115 3728 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SYCE2Q6PIF2 EPSTI1-202ENST00000313640 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
SYCE2Q6PIF2 AC010595.1-201ENST00000507387 1453 ntBASIC10.82□□□□□ -0.68
SYCE2Q6PIF2 MATN2-213ENST00000522025 2731 ntTSL 5 BASIC10.82□□□□□ -0.68
SYCE2Q6PIF2 ZIC4-202ENST00000425731 3979 ntTSL 2 BASIC10.82□□□□□ -0.68
SYCE2Q6PIF2 FPR2-201ENST00000340023 2262 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SYCE2Q6PIF2 AL023802.1-201ENST00000447372 3775 ntTSL 2 BASIC10.82□□□□□ -0.68
SYCE2Q6PIF2 AP000552.1-201ENST00000447720 3215 ntTSL 5 BASIC10.82□□□□□ -0.68
SYCE2Q6PIF2 C10orf53-204ENST00000535836 2090 ntTSL 5 BASIC10.82□□□□□ -0.68
SYCE2Q6PIF2 ARPC3-201ENST00000228825 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 398.1 ms