Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC10.93□□□□□ -0.66
LINC01558Q9Y6Z2 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC01558Q9Y6Z2 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01558Q9Y6Z2 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
LINC01558Q9Y6Z2 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01558Q9Y6Z2 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01558Q9Y6Z2 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC01558Q9Y6Z2 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01558Q9Y6Z2 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01558Q9Y6Z2 LINC00273-201ENST00000539813 1452 ntBASIC10.93□□□□□ -0.66
LINC01558Q9Y6Z2 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01558Q9Y6Z2 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01558Q9Y6Z2 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01558Q9Y6Z2 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC10.93□□□□□ -0.66
LINC01558Q9Y6Z2 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01558Q9Y6Z2 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC10.92□□□□□ -0.66
LINC01558Q9Y6Z2 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01558Q9Y6Z2 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
LINC01558Q9Y6Z2 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01558Q9Y6Z2 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01558Q9Y6Z2 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
LINC01558Q9Y6Z2 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
LINC01558Q9Y6Z2 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01558Q9Y6Z2 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
LINC01558Q9Y6Z2 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01558Q9Y6Z2 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC10.92□□□□□ -0.66
LINC01558Q9Y6Z2 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01558Q9Y6Z2 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01558Q9Y6Z2 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01558Q9Y6Z2 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC10.92□□□□□ -0.66
LINC01558Q9Y6Z2 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01558Q9Y6Z2 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
LINC01558Q9Y6Z2 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01558Q9Y6Z2 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01558Q9Y6Z2 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01558Q9Y6Z2 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC10.92□□□□□ -0.66
LINC01558Q9Y6Z2 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
LINC01558Q9Y6Z2 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01558Q9Y6Z2 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01558Q9Y6Z2 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01558Q9Y6Z2 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01558Q9Y6Z2 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01558Q9Y6Z2 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01558Q9Y6Z2 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01558Q9Y6Z2 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01558Q9Y6Z2 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01558Q9Y6Z2 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
LINC01558Q9Y6Z2 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC10.92□□□□□ -0.66
LINC01558Q9Y6Z2 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01558Q9Y6Z2 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01558Q9Y6Z2 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01558Q9Y6Z2 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01558Q9Y6Z2 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01558Q9Y6Z2 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01558Q9Y6Z2 AC020763.4-201ENST00000623414 4170 ntBASIC10.91□□□□□ -0.66
LINC01558Q9Y6Z2 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
LINC01558Q9Y6Z2 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01558Q9Y6Z2 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
LINC01558Q9Y6Z2 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01558Q9Y6Z2 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC10.91□□□□□ -0.66
LINC01558Q9Y6Z2 DYNLL1-208ENST00000550178 581 ntBASIC10.91□□□□□ -0.66
LINC01558Q9Y6Z2 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
LINC01558Q9Y6Z2 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01558Q9Y6Z2 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC10.91□□□□□ -0.66
LINC01558Q9Y6Z2 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
LINC01558Q9Y6Z2 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC10.91□□□□□ -0.66
LINC01558Q9Y6Z2 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01558Q9Y6Z2 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01558Q9Y6Z2 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01558Q9Y6Z2 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01558Q9Y6Z2 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC10.91□□□□□ -0.66
LINC01558Q9Y6Z2 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC10.91□□□□□ -0.66
LINC01558Q9Y6Z2 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
LINC01558Q9Y6Z2 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01558Q9Y6Z2 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01558Q9Y6Z2 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01558Q9Y6Z2 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01558Q9Y6Z2 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
LINC01558Q9Y6Z2 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01558Q9Y6Z2 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01558Q9Y6Z2 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01558Q9Y6Z2 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC10.91□□□□□ -0.66
LINC01558Q9Y6Z2 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
LINC01558Q9Y6Z2 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
LINC01558Q9Y6Z2 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01558Q9Y6Z2 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01558Q9Y6Z2 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC10.9□□□□□ -0.66
LINC01558Q9Y6Z2 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01558Q9Y6Z2 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01558Q9Y6Z2 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01558Q9Y6Z2 PRORSD1P-202ENST00000563365 2154 ntBASIC10.9□□□□□ -0.66
LINC01558Q9Y6Z2 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01558Q9Y6Z2 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
LINC01558Q9Y6Z2 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01558Q9Y6Z2 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01558Q9Y6Z2 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
LINC01558Q9Y6Z2 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01558Q9Y6Z2 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
LINC01558Q9Y6Z2 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
LINC01558Q9Y6Z2 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms