Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGC4Q9Y5F7 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGC4Q9Y5F7 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
PCDHGC4Q9Y5F7 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGC4Q9Y5F7 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGC4Q9Y5F7 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.19■□□□□ 0.98
PCDHGC4Q9Y5F7 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGC4Q9Y5F7 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.19■□□□□ 0.98
PCDHGC4Q9Y5F7 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGC4Q9Y5F7 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
PCDHGC4Q9Y5F7 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGC4Q9Y5F7 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGC4Q9Y5F7 AC004911.1-201ENST00000416316 871 ntBASIC21.19■□□□□ 0.98
PCDHGC4Q9Y5F7 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.19■□□□□ 0.98
PCDHGC4Q9Y5F7 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.19■□□□□ 0.98
PCDHGC4Q9Y5F7 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.19■□□□□ 0.98
PCDHGC4Q9Y5F7 AL137784.2-201ENST00000607332 1000 ntBASIC21.19■□□□□ 0.98
PCDHGC4Q9Y5F7 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.19■□□□□ 0.98
PCDHGC4Q9Y5F7 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.19■□□□□ 0.98
PCDHGC4Q9Y5F7 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGC4Q9Y5F7 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.19■□□□□ 0.98
PCDHGC4Q9Y5F7 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGC4Q9Y5F7 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.19■□□□□ 0.98
PCDHGC4Q9Y5F7 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.19■□□□□ 0.98
PCDHGC4Q9Y5F7 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PCDHGC4Q9Y5F7 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
PCDHGC4Q9Y5F7 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
PCDHGC4Q9Y5F7 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGC4Q9Y5F7 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.18■□□□□ 0.98
PCDHGC4Q9Y5F7 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.18■□□□□ 0.98
PCDHGC4Q9Y5F7 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.18■□□□□ 0.98
PCDHGC4Q9Y5F7 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.18■□□□□ 0.98
PCDHGC4Q9Y5F7 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.18■□□□□ 0.98
PCDHGC4Q9Y5F7 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.18■□□□□ 0.98
PCDHGC4Q9Y5F7 AC120498.10-201ENST00000621827 505 ntBASIC21.18■□□□□ 0.98
PCDHGC4Q9Y5F7 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGC4Q9Y5F7 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGC4Q9Y5F7 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGC4Q9Y5F7 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
PCDHGC4Q9Y5F7 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGC4Q9Y5F7 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PCDHGC4Q9Y5F7 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHGC4Q9Y5F7 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHGC4Q9Y5F7 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHGC4Q9Y5F7 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHGC4Q9Y5F7 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHGC4Q9Y5F7 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHGC4Q9Y5F7 KRT18P11-201ENST00000435214 1283 ntBASIC21.17■□□□□ 0.98
PCDHGC4Q9Y5F7 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.17■□□□□ 0.98
PCDHGC4Q9Y5F7 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.17■□□□□ 0.98
PCDHGC4Q9Y5F7 MYCNOS-205ENST00000641950 531 ntBASIC21.17■□□□□ 0.98
PCDHGC4Q9Y5F7 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHGC4Q9Y5F7 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PCDHGC4Q9Y5F7 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
PCDHGC4Q9Y5F7 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHGC4Q9Y5F7 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHGC4Q9Y5F7 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
PCDHGC4Q9Y5F7 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
PCDHGC4Q9Y5F7 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
PCDHGC4Q9Y5F7 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHGC4Q9Y5F7 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.16■□□□□ 0.98
PCDHGC4Q9Y5F7 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.16■□□□□ 0.98
PCDHGC4Q9Y5F7 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.16■□□□□ 0.98
PCDHGC4Q9Y5F7 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
PCDHGC4Q9Y5F7 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PCDHGC4Q9Y5F7 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGC4Q9Y5F7 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.15■□□□□ 0.98
PCDHGC4Q9Y5F7 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGC4Q9Y5F7 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGC4Q9Y5F7 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGC4Q9Y5F7 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
PCDHGC4Q9Y5F7 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGC4Q9Y5F7 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.15■□□□□ 0.98
PCDHGC4Q9Y5F7 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGC4Q9Y5F7 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.15■□□□□ 0.98
PCDHGC4Q9Y5F7 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGC4Q9Y5F7 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGC4Q9Y5F7 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGC4Q9Y5F7 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGC4Q9Y5F7 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.15■□□□□ 0.98
PCDHGC4Q9Y5F7 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
PCDHGC4Q9Y5F7 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PCDHGC4Q9Y5F7 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.14■□□□□ 0.98
PCDHGC4Q9Y5F7 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.14■□□□□ 0.98
PCDHGC4Q9Y5F7 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.14■□□□□ 0.98
PCDHGC4Q9Y5F7 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.14■□□□□ 0.98
PCDHGC4Q9Y5F7 KRT16P2-201ENST00000414673 1423 ntBASIC21.14■□□□□ 0.98
PCDHGC4Q9Y5F7 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
PCDHGC4Q9Y5F7 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.14■□□□□ 0.97
PCDHGC4Q9Y5F7 AC026310.3-201ENST00000625186 2373 ntBASIC21.14■□□□□ 0.97
PCDHGC4Q9Y5F7 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
PCDHGC4Q9Y5F7 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
PCDHGC4Q9Y5F7 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.14■□□□□ 0.97
PCDHGC4Q9Y5F7 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
PCDHGC4Q9Y5F7 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.14■□□□□ 0.97
PCDHGC4Q9Y5F7 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHGC4Q9Y5F7 AC011767.1-201ENST00000617410 1153 ntBASIC21.14■□□□□ 0.97
PCDHGC4Q9Y5F7 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHGC4Q9Y5F7 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PCDHGC4Q9Y5F7 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms