Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC8.78□□□□□ -1
MACF1Q9UPN3 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC8.78□□□□□ -1
MACF1Q9UPN3 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC8.78□□□□□ -1
MACF1Q9UPN3 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
MACF1Q9UPN3 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC8.78□□□□□ -1
MACF1Q9UPN3 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
MACF1Q9UPN3 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
MACF1Q9UPN3 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC8.78□□□□□ -1
MACF1Q9UPN3 REXO1L10P-201ENST00000615707 1290 ntBASIC8.78□□□□□ -1
MACF1Q9UPN3 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC8.78□□□□□ -1
MACF1Q9UPN3 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
MACF1Q9UPN3 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC8.78□□□□□ -1
MACF1Q9UPN3 AL353807.1-201ENST00000427475 662 ntBASIC8.78□□□□□ -1
MACF1Q9UPN3 RBM17P1-201ENST00000453646 1190 ntBASIC8.78□□□□□ -1
MACF1Q9UPN3 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
MACF1Q9UPN3 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC8.78□□□□□ -1
MACF1Q9UPN3 CD81-212ENST00000526072 1172 ntTSL 5 BASIC8.78□□□□□ -1
MACF1Q9UPN3 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC8.78□□□□□ -1
MACF1Q9UPN3 ATP5G1P1-201ENST00000448724 379 ntBASIC8.78□□□□□ -1
MACF1Q9UPN3 AL359075.1-203ENST00000462729 1002 ntBASIC8.78□□□□□ -1
MACF1Q9UPN3 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC8.78□□□□□ -1
MACF1Q9UPN3 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC8.78□□□□□ -1
MACF1Q9UPN3 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC8.78□□□□□ -1
MACF1Q9UPN3 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC8.77□□□□□ -1
MACF1Q9UPN3 MIR1238-201ENST00000408483 83 ntBASIC8.77□□□□□ -1
MACF1Q9UPN3 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC8.77□□□□□ -1
MACF1Q9UPN3 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1
MACF1Q9UPN3 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
MACF1Q9UPN3 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
MACF1Q9UPN3 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1.01
MACF1Q9UPN3 AC144652.1-201ENST00000609974 1624 ntBASIC8.77□□□□□ -1.01
MACF1Q9UPN3 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
MACF1Q9UPN3 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
MACF1Q9UPN3 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
MACF1Q9UPN3 KLF2-202ENST00000592003 564 ntTSL 3 BASIC8.77□□□□□ -1.01
MACF1Q9UPN3 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC8.77□□□□□ -1.01
MACF1Q9UPN3 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC8.77□□□□□ -1.01
MACF1Q9UPN3 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC8.77□□□□□ -1.01
MACF1Q9UPN3 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
MACF1Q9UPN3 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC8.77□□□□□ -1.01
MACF1Q9UPN3 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC8.77□□□□□ -1.01
MACF1Q9UPN3 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC8.77□□□□□ -1.01
MACF1Q9UPN3 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
MACF1Q9UPN3 SRI-203ENST00000419179 1307 ntTSL 2 BASIC8.77□□□□□ -1.01
MACF1Q9UPN3 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
MACF1Q9UPN3 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
MACF1Q9UPN3 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
MACF1Q9UPN3 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
MACF1Q9UPN3 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC8.77□□□□□ -1.01
MACF1Q9UPN3 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC8.77□□□□□ -1.01
MACF1Q9UPN3 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
MACF1Q9UPN3 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
MACF1Q9UPN3 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC8.77□□□□□ -1.01
MACF1Q9UPN3 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC8.77□□□□□ -1.01
MACF1Q9UPN3 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC8.77□□□□□ -1.01
MACF1Q9UPN3 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
MACF1Q9UPN3 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
MACF1Q9UPN3 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
MACF1Q9UPN3 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
MACF1Q9UPN3 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC8.77□□□□□ -1.01
MACF1Q9UPN3 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC8.77□□□□□ -1.01
MACF1Q9UPN3 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1.01
MACF1Q9UPN3 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC8.77□□□□□ -1.01
MACF1Q9UPN3 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
MACF1Q9UPN3 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
MACF1Q9UPN3 AC008622.2-201ENST00000617006 1229 ntBASIC8.77□□□□□ -1.01
MACF1Q9UPN3 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
MACF1Q9UPN3 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC8.76□□□□□ -1.01
MACF1Q9UPN3 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC8.76□□□□□ -1.01
MACF1Q9UPN3 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC8.76□□□□□ -1.01
MACF1Q9UPN3 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
MACF1Q9UPN3 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
MACF1Q9UPN3 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
MACF1Q9UPN3 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC8.76□□□□□ -1.01
MACF1Q9UPN3 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC8.76□□□□□ -1.01
MACF1Q9UPN3 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
MACF1Q9UPN3 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC8.76□□□□□ -1.01
MACF1Q9UPN3 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC8.76□□□□□ -1.01
MACF1Q9UPN3 CRK-204ENST00000574295 1391 ntTSL 5 BASIC8.76□□□□□ -1.01
MACF1Q9UPN3 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC8.76□□□□□ -1.01
MACF1Q9UPN3 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC8.76□□□□□ -1.01
MACF1Q9UPN3 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC8.76□□□□□ -1.01
MACF1Q9UPN3 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC8.76□□□□□ -1.01
MACF1Q9UPN3 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC8.76□□□□□ -1.01
MACF1Q9UPN3 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC8.76□□□□□ -1.01
MACF1Q9UPN3 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC8.76□□□□□ -1.01
MACF1Q9UPN3 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
MACF1Q9UPN3 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
MACF1Q9UPN3 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
MACF1Q9UPN3 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
MACF1Q9UPN3 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC8.76□□□□□ -1.01
MACF1Q9UPN3 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
MACF1Q9UPN3 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
MACF1Q9UPN3 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
MACF1Q9UPN3 AL355355.2-201ENST00000442321 338 ntBASIC8.75□□□□□ -1.01
MACF1Q9UPN3 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC8.75□□□□□ -1.01
MACF1Q9UPN3 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC8.75□□□□□ -1.01
MACF1Q9UPN3 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC8.75□□□□□ -1.01
MACF1Q9UPN3 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC8.75□□□□□ -1.01
MACF1Q9UPN3 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms