Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
LHX6Q9UPM6 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LHX6Q9UPM6 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LHX6Q9UPM6 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
LHX6Q9UPM6 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.83■□□□□ 0.76
LHX6Q9UPM6 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.83■□□□□ 0.76
LHX6Q9UPM6 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LHX6Q9UPM6 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
LHX6Q9UPM6 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LHX6Q9UPM6 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.82■□□□□ 0.76
LHX6Q9UPM6 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.82■□□□□ 0.76
LHX6Q9UPM6 AC233702.5-201ENST00000584107 538 ntBASIC19.82■□□□□ 0.76
LHX6Q9UPM6 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
LHX6Q9UPM6 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.82■□□□□ 0.76
LHX6Q9UPM6 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.82■□□□□ 0.76
LHX6Q9UPM6 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.82■□□□□ 0.76
LHX6Q9UPM6 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LHX6Q9UPM6 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LHX6Q9UPM6 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.82■□□□□ 0.76
LHX6Q9UPM6 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LHX6Q9UPM6 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.81■□□□□ 0.76
LHX6Q9UPM6 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.81■□□□□ 0.76
LHX6Q9UPM6 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
LHX6Q9UPM6 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
LHX6Q9UPM6 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LHX6Q9UPM6 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
LHX6Q9UPM6 LSM12P1-201ENST00000411836 588 ntBASIC19.81■□□□□ 0.76
LHX6Q9UPM6 POU5F1P4-201ENST00000413175 1085 ntBASIC19.81■□□□□ 0.76
LHX6Q9UPM6 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.81■□□□□ 0.76
LHX6Q9UPM6 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.81■□□□□ 0.76
LHX6Q9UPM6 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.81■□□□□ 0.76
LHX6Q9UPM6 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.81■□□□□ 0.76
LHX6Q9UPM6 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.81■□□□□ 0.76
LHX6Q9UPM6 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
LHX6Q9UPM6 AC060766.5-201ENST00000590539 871 ntBASIC19.81■□□□□ 0.76
LHX6Q9UPM6 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
LHX6Q9UPM6 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
LHX6Q9UPM6 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.81■□□□□ 0.76
LHX6Q9UPM6 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LHX6Q9UPM6 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LHX6Q9UPM6 RPS2P55-201ENST00000397318 883 ntBASIC19.8■□□□□ 0.76
LHX6Q9UPM6 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.8■□□□□ 0.76
LHX6Q9UPM6 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.8■□□□□ 0.76
LHX6Q9UPM6 AC107956.1-201ENST00000494359 873 ntBASIC19.8■□□□□ 0.76
LHX6Q9UPM6 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.8■□□□□ 0.76
LHX6Q9UPM6 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
LHX6Q9UPM6 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LHX6Q9UPM6 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.8■□□□□ 0.76
LHX6Q9UPM6 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
LHX6Q9UPM6 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
LHX6Q9UPM6 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LHX6Q9UPM6 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.79■□□□□ 0.76
LHX6Q9UPM6 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LHX6Q9UPM6 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LHX6Q9UPM6 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.79■□□□□ 0.76
LHX6Q9UPM6 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.79■□□□□ 0.76
LHX6Q9UPM6 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LHX6Q9UPM6 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LHX6Q9UPM6 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LHX6Q9UPM6 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LHX6Q9UPM6 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LHX6Q9UPM6 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.79■□□□□ 0.76
LHX6Q9UPM6 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LHX6Q9UPM6 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LHX6Q9UPM6 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.79■□□□□ 0.76
LHX6Q9UPM6 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LHX6Q9UPM6 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.79■□□□□ 0.76
LHX6Q9UPM6 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.79■□□□□ 0.76
LHX6Q9UPM6 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LHX6Q9UPM6 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LHX6Q9UPM6 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LHX6Q9UPM6 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
LHX6Q9UPM6 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.78■□□□□ 0.76
LHX6Q9UPM6 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.78■□□□□ 0.76
LHX6Q9UPM6 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.78■□□□□ 0.76
LHX6Q9UPM6 TSPY15P-201ENST00000457163 923 ntBASIC19.78■□□□□ 0.76
LHX6Q9UPM6 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
LHX6Q9UPM6 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.78■□□□□ 0.76
LHX6Q9UPM6 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.78■□□□□ 0.76
LHX6Q9UPM6 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.78■□□□□ 0.76
LHX6Q9UPM6 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.78■□□□□ 0.76
LHX6Q9UPM6 MIR4785-201ENST00000585005 73 ntBASIC19.78■□□□□ 0.76
LHX6Q9UPM6 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.78■□□□□ 0.76
LHX6Q9UPM6 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.78■□□□□ 0.76
LHX6Q9UPM6 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LHX6Q9UPM6 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LHX6Q9UPM6 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
LHX6Q9UPM6 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LHX6Q9UPM6 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LHX6Q9UPM6 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
LHX6Q9UPM6 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.77■□□□□ 0.76
LHX6Q9UPM6 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LHX6Q9UPM6 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LHX6Q9UPM6 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LHX6Q9UPM6 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LHX6Q9UPM6 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
LHX6Q9UPM6 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LHX6Q9UPM6 AC120057.1-201ENST00000483947 663 ntBASIC19.77■□□□□ 0.76
LHX6Q9UPM6 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
LHX6Q9UPM6 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms