Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC24.02■■□□□ 1.44
PCDHA4Q9UN74 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC24.02■■□□□ 1.44
PCDHA4Q9UN74 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC24.02■■□□□ 1.44
PCDHA4Q9UN74 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHA4Q9UN74 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHA4Q9UN74 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHA4Q9UN74 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHA4Q9UN74 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHA4Q9UN74 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
PCDHA4Q9UN74 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHA4Q9UN74 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC24.02■■□□□ 1.44
PCDHA4Q9UN74 UBE2DNL-204ENST00000602536 740 ntBASIC24.02■■□□□ 1.44
PCDHA4Q9UN74 TFG-210ENST00000620299 1289 ntTSL 5 BASIC24.02■■□□□ 1.44
PCDHA4Q9UN74 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
PCDHA4Q9UN74 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
PCDHA4Q9UN74 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHA4Q9UN74 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PCDHA4Q9UN74 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.43
PCDHA4Q9UN74 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHA4Q9UN74 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
PCDHA4Q9UN74 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHA4Q9UN74 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHA4Q9UN74 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHA4Q9UN74 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHA4Q9UN74 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHA4Q9UN74 AC137761.2-201ENST00000561729 223 ntBASIC24.01■■□□□ 1.43
PCDHA4Q9UN74 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC24.01■■□□□ 1.43
PCDHA4Q9UN74 AC145350.3-201ENST00000569033 163 ntBASIC24.01■■□□□ 1.43
PCDHA4Q9UN74 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC24.01■■□□□ 1.43
PCDHA4Q9UN74 AC022517.1-201ENST00000592429 346 ntBASIC24.01■■□□□ 1.43
PCDHA4Q9UN74 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHA4Q9UN74 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
PCDHA4Q9UN74 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC24.01■■□□□ 1.43
PCDHA4Q9UN74 PALM-207ENST00000590161 2137 ntTSL 4 BASIC24.01■■□□□ 1.43
PCDHA4Q9UN74 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
PCDHA4Q9UN74 ME3-201ENST00000323418 1068 ntTSL 5 BASIC24■■□□□ 1.43
PCDHA4Q9UN74 HSCB-202ENST00000398941 955 ntTSL 2 BASIC24■■□□□ 1.43
PCDHA4Q9UN74 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC24■■□□□ 1.43
PCDHA4Q9UN74 SLC7A5P1-201ENST00000568957 537 ntBASIC24■■□□□ 1.43
PCDHA4Q9UN74 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC24■■□□□ 1.43
PCDHA4Q9UN74 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PCDHA4Q9UN74 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHA4Q9UN74 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHA4Q9UN74 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC23.99■■□□□ 1.43
PCDHA4Q9UN74 PARL-206ENST00000435888 1098 ntTSL 5 BASIC23.99■■□□□ 1.43
PCDHA4Q9UN74 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC23.99■■□□□ 1.43
PCDHA4Q9UN74 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHA4Q9UN74 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC23.99■■□□□ 1.43
PCDHA4Q9UN74 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
PCDHA4Q9UN74 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHA4Q9UN74 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHA4Q9UN74 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PCDHA4Q9UN74 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHA4Q9UN74 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHA4Q9UN74 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
PCDHA4Q9UN74 AC006015.1-201ENST00000429970 570 ntBASIC23.98■■□□□ 1.43
PCDHA4Q9UN74 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHA4Q9UN74 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC23.98■■□□□ 1.43
PCDHA4Q9UN74 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHA4Q9UN74 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC23.98■■□□□ 1.43
PCDHA4Q9UN74 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHA4Q9UN74 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC23.98■■□□□ 1.43
PCDHA4Q9UN74 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHA4Q9UN74 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHA4Q9UN74 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHA4Q9UN74 CLDN5-201ENST00000403084 2357 ntBASIC23.98■■□□□ 1.43
PCDHA4Q9UN74 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PCDHA4Q9UN74 AF106564.1-201ENST00000607058 2553 ntBASIC23.98■■□□□ 1.43
PCDHA4Q9UN74 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PCDHA4Q9UN74 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PCDHA4Q9UN74 PARP1-202ENST00000366792 553 ntTSL 3 BASIC23.97■■□□□ 1.43
PCDHA4Q9UN74 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
PCDHA4Q9UN74 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC23.97■■□□□ 1.43
PCDHA4Q9UN74 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
PCDHA4Q9UN74 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
PCDHA4Q9UN74 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC23.97■■□□□ 1.43
PCDHA4Q9UN74 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
PCDHA4Q9UN74 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC23.97■■□□□ 1.43
PCDHA4Q9UN74 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC23.97■■□□□ 1.43
PCDHA4Q9UN74 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
PCDHA4Q9UN74 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC23.96■■□□□ 1.43
PCDHA4Q9UN74 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHA4Q9UN74 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC23.96■■□□□ 1.43
PCDHA4Q9UN74 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHA4Q9UN74 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHA4Q9UN74 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
PCDHA4Q9UN74 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHA4Q9UN74 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHA4Q9UN74 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHA4Q9UN74 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHA4Q9UN74 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC23.96■■□□□ 1.43
PCDHA4Q9UN74 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
PCDHA4Q9UN74 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHA4Q9UN74 KRT18P11-201ENST00000435214 1283 ntBASIC23.96■■□□□ 1.43
PCDHA4Q9UN74 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC23.96■■□□□ 1.43
PCDHA4Q9UN74 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC23.96■■□□□ 1.43
PCDHA4Q9UN74 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC23.96■■□□□ 1.43
PCDHA4Q9UN74 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC23.96■■□□□ 1.43
PCDHA4Q9UN74 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PCDHA4Q9UN74 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC23.96■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms