Protein–RNA interactions for Protein: Q9UKN5

PRDM4, PR domain zinc finger protein 4, humanhuman

Predictions only

Length 801 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4Q9UKN5 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.63■■□□□ 1.05
PRDM4Q9UKN5 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.63■■□□□ 1.05
PRDM4Q9UKN5 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.63■■□□□ 1.05
PRDM4Q9UKN5 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC21.63■■□□□ 1.05
PRDM4Q9UKN5 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PRDM4Q9UKN5 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC21.63■■□□□ 1.05
PRDM4Q9UKN5 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
PRDM4Q9UKN5 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PRDM4Q9UKN5 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PRDM4Q9UKN5 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PRDM4Q9UKN5 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PRDM4Q9UKN5 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.63■■□□□ 1.05
PRDM4Q9UKN5 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC21.63■■□□□ 1.05
PRDM4Q9UKN5 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
PRDM4Q9UKN5 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PRDM4Q9UKN5 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PRDM4Q9UKN5 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PRDM4Q9UKN5 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PRDM4Q9UKN5 AC018470.1-201ENST00000624790 3129 ntBASIC21.62■■□□□ 1.05
PRDM4Q9UKN5 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
PRDM4Q9UKN5 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PRDM4Q9UKN5 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.62■■□□□ 1.05
PRDM4Q9UKN5 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.62■■□□□ 1.05
PRDM4Q9UKN5 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.62■■□□□ 1.05
PRDM4Q9UKN5 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC21.62■■□□□ 1.05
PRDM4Q9UKN5 AC018755.3-202ENST00000596210 929 ntBASIC21.62■■□□□ 1.05
PRDM4Q9UKN5 AL391005.1-201ENST00000623953 2435 ntBASIC21.62■■□□□ 1.05
PRDM4Q9UKN5 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PRDM4Q9UKN5 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC21.62■■□□□ 1.05
PRDM4Q9UKN5 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.62■■□□□ 1.05
PRDM4Q9UKN5 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
PRDM4Q9UKN5 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC21.62■■□□□ 1.05
PRDM4Q9UKN5 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC21.62■■□□□ 1.05
PRDM4Q9UKN5 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRDM4Q9UKN5 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.61■■□□□ 1.05
PRDM4Q9UKN5 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
PRDM4Q9UKN5 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PRDM4Q9UKN5 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRDM4Q9UKN5 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.61■■□□□ 1.05
PRDM4Q9UKN5 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.61■■□□□ 1.05
PRDM4Q9UKN5 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRDM4Q9UKN5 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.61■■□□□ 1.05
PRDM4Q9UKN5 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PRDM4Q9UKN5 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.61■■□□□ 1.05
PRDM4Q9UKN5 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PRDM4Q9UKN5 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PRDM4Q9UKN5 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
PRDM4Q9UKN5 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PRDM4Q9UKN5 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
PRDM4Q9UKN5 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PRDM4Q9UKN5 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PRDM4Q9UKN5 AC087742.1-201ENST00000575880 1738 ntBASIC21.6■■□□□ 1.05
PRDM4Q9UKN5 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PRDM4Q9UKN5 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.6■■□□□ 1.05
PRDM4Q9UKN5 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PRDM4Q9UKN5 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
PRDM4Q9UKN5 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PRDM4Q9UKN5 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PRDM4Q9UKN5 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
PRDM4Q9UKN5 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PRDM4Q9UKN5 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
PRDM4Q9UKN5 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PRDM4Q9UKN5 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PRDM4Q9UKN5 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
PRDM4Q9UKN5 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PRDM4Q9UKN5 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PRDM4Q9UKN5 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
PRDM4Q9UKN5 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.59■■□□□ 1.05
PRDM4Q9UKN5 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PRDM4Q9UKN5 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC21.58■■□□□ 1.05
PRDM4Q9UKN5 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.58■■□□□ 1.05
PRDM4Q9UKN5 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PRDM4Q9UKN5 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PRDM4Q9UKN5 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PRDM4Q9UKN5 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PRDM4Q9UKN5 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PRDM4Q9UKN5 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC21.58■■□□□ 1.05
PRDM4Q9UKN5 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PRDM4Q9UKN5 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC21.58■■□□□ 1.04
PRDM4Q9UKN5 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
PRDM4Q9UKN5 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.58■■□□□ 1.04
PRDM4Q9UKN5 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
PRDM4Q9UKN5 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
PRDM4Q9UKN5 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
PRDM4Q9UKN5 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
PRDM4Q9UKN5 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC21.58■■□□□ 1.04
PRDM4Q9UKN5 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PRDM4Q9UKN5 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
PRDM4Q9UKN5 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC21.57■■□□□ 1.04
PRDM4Q9UKN5 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PRDM4Q9UKN5 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PRDM4Q9UKN5 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PRDM4Q9UKN5 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC21.57■■□□□ 1.04
PRDM4Q9UKN5 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.57■■□□□ 1.04
PRDM4Q9UKN5 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
PRDM4Q9UKN5 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
PRDM4Q9UKN5 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.57■■□□□ 1.04
PRDM4Q9UKN5 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC21.57■■□□□ 1.04
PRDM4Q9UKN5 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PRDM4Q9UKN5 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms