Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 KRT19P1-201ENST00000405746 1186 ntBASIC19.87■□□□□ 0.77
KCMF1Q9P0J7 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.87■□□□□ 0.77
KCMF1Q9P0J7 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.87■□□□□ 0.77
KCMF1Q9P0J7 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.87■□□□□ 0.77
KCMF1Q9P0J7 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.87■□□□□ 0.77
KCMF1Q9P0J7 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.87■□□□□ 0.77
KCMF1Q9P0J7 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KCMF1Q9P0J7 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.87■□□□□ 0.77
KCMF1Q9P0J7 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KCMF1Q9P0J7 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
KCMF1Q9P0J7 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
KCMF1Q9P0J7 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
KCMF1Q9P0J7 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.86■□□□□ 0.77
KCMF1Q9P0J7 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.86■□□□□ 0.77
KCMF1Q9P0J7 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KCMF1Q9P0J7 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.86■□□□□ 0.77
KCMF1Q9P0J7 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.86■□□□□ 0.77
KCMF1Q9P0J7 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
KCMF1Q9P0J7 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.86■□□□□ 0.77
KCMF1Q9P0J7 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.86■□□□□ 0.77
KCMF1Q9P0J7 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.86■□□□□ 0.77
KCMF1Q9P0J7 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.86■□□□□ 0.77
KCMF1Q9P0J7 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
KCMF1Q9P0J7 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.86■□□□□ 0.77
KCMF1Q9P0J7 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
KCMF1Q9P0J7 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
KCMF1Q9P0J7 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.85■□□□□ 0.77
KCMF1Q9P0J7 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.85■□□□□ 0.77
KCMF1Q9P0J7 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
KCMF1Q9P0J7 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.85■□□□□ 0.77
KCMF1Q9P0J7 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KCMF1Q9P0J7 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KCMF1Q9P0J7 POU5F1P4-201ENST00000413175 1085 ntBASIC19.85■□□□□ 0.77
KCMF1Q9P0J7 AC022517.1-201ENST00000592429 346 ntBASIC19.85■□□□□ 0.77
KCMF1Q9P0J7 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KCMF1Q9P0J7 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.85■□□□□ 0.77
KCMF1Q9P0J7 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
KCMF1Q9P0J7 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.85■□□□□ 0.77
KCMF1Q9P0J7 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KCMF1Q9P0J7 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.85■□□□□ 0.77
KCMF1Q9P0J7 AC007375.3-201ENST00000600936 2314 ntBASIC19.85■□□□□ 0.77
KCMF1Q9P0J7 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
KCMF1Q9P0J7 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
KCMF1Q9P0J7 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
KCMF1Q9P0J7 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KCMF1Q9P0J7 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
KCMF1Q9P0J7 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KCMF1Q9P0J7 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.84■□□□□ 0.77
KCMF1Q9P0J7 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
KCMF1Q9P0J7 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.84■□□□□ 0.77
KCMF1Q9P0J7 AC008175.2-201ENST00000612840 297 ntBASIC19.84■□□□□ 0.77
KCMF1Q9P0J7 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KCMF1Q9P0J7 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KCMF1Q9P0J7 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KCMF1Q9P0J7 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.84■□□□□ 0.77
KCMF1Q9P0J7 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KCMF1Q9P0J7 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
KCMF1Q9P0J7 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
KCMF1Q9P0J7 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
KCMF1Q9P0J7 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
KCMF1Q9P0J7 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
KCMF1Q9P0J7 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.83■□□□□ 0.77
KCMF1Q9P0J7 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.83■□□□□ 0.77
KCMF1Q9P0J7 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.83■□□□□ 0.77
KCMF1Q9P0J7 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
KCMF1Q9P0J7 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.83■□□□□ 0.77
KCMF1Q9P0J7 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
KCMF1Q9P0J7 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
KCMF1Q9P0J7 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
KCMF1Q9P0J7 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
KCMF1Q9P0J7 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.83■□□□□ 0.76
KCMF1Q9P0J7 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.83■□□□□ 0.76
KCMF1Q9P0J7 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
KCMF1Q9P0J7 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
KCMF1Q9P0J7 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KCMF1Q9P0J7 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KCMF1Q9P0J7 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KCMF1Q9P0J7 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
KCMF1Q9P0J7 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
KCMF1Q9P0J7 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.82■□□□□ 0.76
KCMF1Q9P0J7 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.82■□□□□ 0.76
KCMF1Q9P0J7 KRT18P20-201ENST00000548986 1279 ntBASIC19.82■□□□□ 0.76
KCMF1Q9P0J7 SLC7A5P2-201ENST00000553010 536 ntBASIC19.82■□□□□ 0.76
KCMF1Q9P0J7 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
KCMF1Q9P0J7 IKBKGP1-201ENST00000612193 1073 ntBASIC19.82■□□□□ 0.76
KCMF1Q9P0J7 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KCMF1Q9P0J7 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
KCMF1Q9P0J7 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
KCMF1Q9P0J7 FEM1AP4-201ENST00000443167 1987 ntBASIC19.82■□□□□ 0.76
KCMF1Q9P0J7 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.82■□□□□ 0.76
KCMF1Q9P0J7 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
KCMF1Q9P0J7 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
KCMF1Q9P0J7 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KCMF1Q9P0J7 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KCMF1Q9P0J7 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.81■□□□□ 0.76
KCMF1Q9P0J7 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
KCMF1Q9P0J7 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
KCMF1Q9P0J7 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KCMF1Q9P0J7 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KCMF1Q9P0J7 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms