Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PDLIM7Q9NR12 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PDLIM7Q9NR12 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
PDLIM7Q9NR12 UNC93B4-201ENST00000505679 747 ntBASIC23.62■■□□□ 1.37
PDLIM7Q9NR12 AC091874.3-201ENST00000512672 1195 ntBASIC23.62■■□□□ 1.37
PDLIM7Q9NR12 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC23.62■■□□□ 1.37
PDLIM7Q9NR12 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC23.62■■□□□ 1.37
PDLIM7Q9NR12 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
PDLIM7Q9NR12 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
PDLIM7Q9NR12 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PDLIM7Q9NR12 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PDLIM7Q9NR12 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PDLIM7Q9NR12 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PDLIM7Q9NR12 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PDLIM7Q9NR12 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC23.61■■□□□ 1.37
PDLIM7Q9NR12 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
PDLIM7Q9NR12 AC003102.1-202ENST00000563394 1796 ntBASIC23.61■■□□□ 1.37
PDLIM7Q9NR12 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PDLIM7Q9NR12 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PDLIM7Q9NR12 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC23.61■■□□□ 1.37
PDLIM7Q9NR12 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC23.61■■□□□ 1.37
PDLIM7Q9NR12 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
PDLIM7Q9NR12 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PDLIM7Q9NR12 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PDLIM7Q9NR12 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
PDLIM7Q9NR12 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC23.61■■□□□ 1.37
PDLIM7Q9NR12 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC23.61■■□□□ 1.37
PDLIM7Q9NR12 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
PDLIM7Q9NR12 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PDLIM7Q9NR12 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PDLIM7Q9NR12 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
PDLIM7Q9NR12 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC23.61■■□□□ 1.37
PDLIM7Q9NR12 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PDLIM7Q9NR12 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC23.6■■□□□ 1.37
PDLIM7Q9NR12 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC23.6■■□□□ 1.37
PDLIM7Q9NR12 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC23.6■■□□□ 1.37
PDLIM7Q9NR12 LSR-203ENST00000360798 1963 ntTSL 2 BASIC23.6■■□□□ 1.37
PDLIM7Q9NR12 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PDLIM7Q9NR12 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PDLIM7Q9NR12 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC23.6■■□□□ 1.37
PDLIM7Q9NR12 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC23.6■■□□□ 1.37
PDLIM7Q9NR12 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC23.6■■□□□ 1.37
PDLIM7Q9NR12 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
PDLIM7Q9NR12 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC23.6■■□□□ 1.37
PDLIM7Q9NR12 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC23.6■■□□□ 1.37
PDLIM7Q9NR12 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC23.6■■□□□ 1.37
PDLIM7Q9NR12 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PDLIM7Q9NR12 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PDLIM7Q9NR12 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
PDLIM7Q9NR12 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PDLIM7Q9NR12 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PDLIM7Q9NR12 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
PDLIM7Q9NR12 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PDLIM7Q9NR12 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
PDLIM7Q9NR12 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC23.59■■□□□ 1.37
PDLIM7Q9NR12 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC23.59■■□□□ 1.37
PDLIM7Q9NR12 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC23.59■■□□□ 1.37
PDLIM7Q9NR12 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
PDLIM7Q9NR12 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC23.59■■□□□ 1.37
PDLIM7Q9NR12 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC23.59■■□□□ 1.37
PDLIM7Q9NR12 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PDLIM7Q9NR12 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PDLIM7Q9NR12 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
PDLIM7Q9NR12 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC23.59■■□□□ 1.37
PDLIM7Q9NR12 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC23.59■■□□□ 1.37
PDLIM7Q9NR12 FAM99A-202ENST00000538190 1989 ntBASIC23.59■■□□□ 1.37
PDLIM7Q9NR12 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PDLIM7Q9NR12 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PDLIM7Q9NR12 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC23.59■■□□□ 1.37
PDLIM7Q9NR12 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PDLIM7Q9NR12 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PDLIM7Q9NR12 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
PDLIM7Q9NR12 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PDLIM7Q9NR12 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PDLIM7Q9NR12 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PDLIM7Q9NR12 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC23.58■■□□□ 1.37
PDLIM7Q9NR12 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC23.58■■□□□ 1.37
PDLIM7Q9NR12 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC23.58■■□□□ 1.37
PDLIM7Q9NR12 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC23.58■■□□□ 1.37
PDLIM7Q9NR12 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC23.58■■□□□ 1.37
PDLIM7Q9NR12 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PDLIM7Q9NR12 AC053503.5-201ENST00000601508 636 ntBASIC23.58■■□□□ 1.37
PDLIM7Q9NR12 INO80E-214ENST00000620599 515 ntTSL 2 BASIC23.58■■□□□ 1.37
PDLIM7Q9NR12 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PDLIM7Q9NR12 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PDLIM7Q9NR12 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PDLIM7Q9NR12 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
PDLIM7Q9NR12 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PDLIM7Q9NR12 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
PDLIM7Q9NR12 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC23.57■■□□□ 1.36
PDLIM7Q9NR12 USP36-216ENST00000589424 970 ntTSL 5 BASIC23.57■■□□□ 1.36
PDLIM7Q9NR12 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC23.57■■□□□ 1.36
PDLIM7Q9NR12 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PDLIM7Q9NR12 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PDLIM7Q9NR12 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC23.57■■□□□ 1.36
PDLIM7Q9NR12 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PDLIM7Q9NR12 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PDLIM7Q9NR12 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC23.57■■□□□ 1.36
PDLIM7Q9NR12 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PDLIM7Q9NR12 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms