Protein–RNA interactions for Protein: Q9H6L5

RETREG1, Reticulophagy regulator 1, humanhuman

Predictions only

Length 497 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1Q9H6L5 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RETREG1Q9H6L5 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.43■■□□□ 1.02
RETREG1Q9H6L5 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.43■■□□□ 1.02
RETREG1Q9H6L5 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.42■■□□□ 1.02
RETREG1Q9H6L5 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
RETREG1Q9H6L5 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.42■■□□□ 1.02
RETREG1Q9H6L5 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
RETREG1Q9H6L5 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RETREG1Q9H6L5 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.42■■□□□ 1.02
RETREG1Q9H6L5 LINC00565-201ENST00000562710 2331 ntBASIC21.42■■□□□ 1.02
RETREG1Q9H6L5 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.42■■□□□ 1.02
RETREG1Q9H6L5 RARRES2P11-201ENST00000635158 484 ntBASIC21.42■■□□□ 1.02
RETREG1Q9H6L5 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.42■■□□□ 1.02
RETREG1Q9H6L5 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
RETREG1Q9H6L5 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
RETREG1Q9H6L5 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.41■■□□□ 1.02
RETREG1Q9H6L5 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.41■■□□□ 1.02
RETREG1Q9H6L5 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RETREG1Q9H6L5 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RETREG1Q9H6L5 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RETREG1Q9H6L5 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.41■■□□□ 1.02
RETREG1Q9H6L5 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.41■■□□□ 1.02
RETREG1Q9H6L5 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.41■■□□□ 1.02
RETREG1Q9H6L5 AC004911.1-201ENST00000416316 871 ntBASIC21.41■■□□□ 1.02
RETREG1Q9H6L5 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.41■■□□□ 1.02
RETREG1Q9H6L5 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.41■■□□□ 1.02
RETREG1Q9H6L5 AC080038.1-201ENST00000611274 1154 ntBASIC21.41■■□□□ 1.02
RETREG1Q9H6L5 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.41■■□□□ 1.02
RETREG1Q9H6L5 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
RETREG1Q9H6L5 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RETREG1Q9H6L5 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RETREG1Q9H6L5 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.4■■□□□ 1.02
RETREG1Q9H6L5 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
RETREG1Q9H6L5 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.4■■□□□ 1.02
RETREG1Q9H6L5 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.4■■□□□ 1.02
RETREG1Q9H6L5 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.4■■□□□ 1.02
RETREG1Q9H6L5 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.4■■□□□ 1.02
RETREG1Q9H6L5 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
RETREG1Q9H6L5 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RETREG1Q9H6L5 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RETREG1Q9H6L5 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RETREG1Q9H6L5 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RETREG1Q9H6L5 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
RETREG1Q9H6L5 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
RETREG1Q9H6L5 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RETREG1Q9H6L5 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RETREG1Q9H6L5 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RETREG1Q9H6L5 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
RETREG1Q9H6L5 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RETREG1Q9H6L5 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.39■■□□□ 1.01
RETREG1Q9H6L5 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.39■■□□□ 1.01
RETREG1Q9H6L5 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RETREG1Q9H6L5 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RETREG1Q9H6L5 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RETREG1Q9H6L5 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.39■■□□□ 1.01
RETREG1Q9H6L5 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.39■■□□□ 1.01
RETREG1Q9H6L5 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RETREG1Q9H6L5 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
RETREG1Q9H6L5 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
RETREG1Q9H6L5 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RETREG1Q9H6L5 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RETREG1Q9H6L5 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RETREG1Q9H6L5 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.38■■□□□ 1.01
RETREG1Q9H6L5 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RETREG1Q9H6L5 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RETREG1Q9H6L5 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.38■■□□□ 1.01
RETREG1Q9H6L5 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.38■■□□□ 1.01
RETREG1Q9H6L5 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.38■■□□□ 1.01
RETREG1Q9H6L5 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
RETREG1Q9H6L5 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
RETREG1Q9H6L5 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
RETREG1Q9H6L5 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RETREG1Q9H6L5 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.38■■□□□ 1.01
RETREG1Q9H6L5 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
RETREG1Q9H6L5 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.38■■□□□ 1.01
RETREG1Q9H6L5 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RETREG1Q9H6L5 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
RETREG1Q9H6L5 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.37■■□□□ 1.01
RETREG1Q9H6L5 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
RETREG1Q9H6L5 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
RETREG1Q9H6L5 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.37■■□□□ 1.01
RETREG1Q9H6L5 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RETREG1Q9H6L5 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RETREG1Q9H6L5 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.37■■□□□ 1.01
RETREG1Q9H6L5 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.37■■□□□ 1.01
RETREG1Q9H6L5 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.37■■□□□ 1.01
RETREG1Q9H6L5 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RETREG1Q9H6L5 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.37■■□□□ 1.01
RETREG1Q9H6L5 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.37■■□□□ 1.01
RETREG1Q9H6L5 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RETREG1Q9H6L5 AL591742.1-201ENST00000604433 565 ntBASIC21.37■■□□□ 1.01
RETREG1Q9H6L5 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RETREG1Q9H6L5 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
RETREG1Q9H6L5 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RETREG1Q9H6L5 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RETREG1Q9H6L5 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RETREG1Q9H6L5 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.36■■□□□ 1.01
RETREG1Q9H6L5 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RETREG1Q9H6L5 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RETREG1Q9H6L5 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms