Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
VCX3BQ9H321 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VCX3BQ9H321 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
VCX3BQ9H321 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.96■□□□□ 0.79
VCX3BQ9H321 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
VCX3BQ9H321 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VCX3BQ9H321 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
VCX3BQ9H321 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
VCX3BQ9H321 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VCX3BQ9H321 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VCX3BQ9H321 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VCX3BQ9H321 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VCX3BQ9H321 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VCX3BQ9H321 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
VCX3BQ9H321 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
VCX3BQ9H321 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
VCX3BQ9H321 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.79
VCX3BQ9H321 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VCX3BQ9H321 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VCX3BQ9H321 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
VCX3BQ9H321 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VCX3BQ9H321 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
VCX3BQ9H321 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.95■□□□□ 0.78
VCX3BQ9H321 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.95■□□□□ 0.78
VCX3BQ9H321 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.95■□□□□ 0.78
VCX3BQ9H321 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VCX3BQ9H321 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VCX3BQ9H321 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VCX3BQ9H321 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VCX3BQ9H321 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.95■□□□□ 0.78
VCX3BQ9H321 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
VCX3BQ9H321 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VCX3BQ9H321 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.94■□□□□ 0.78
VCX3BQ9H321 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.94■□□□□ 0.78
VCX3BQ9H321 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VCX3BQ9H321 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VCX3BQ9H321 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC19.94■□□□□ 0.78
VCX3BQ9H321 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.94■□□□□ 0.78
VCX3BQ9H321 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
VCX3BQ9H321 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
VCX3BQ9H321 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VCX3BQ9H321 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VCX3BQ9H321 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VCX3BQ9H321 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
VCX3BQ9H321 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VCX3BQ9H321 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
VCX3BQ9H321 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
VCX3BQ9H321 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
VCX3BQ9H321 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
VCX3BQ9H321 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
VCX3BQ9H321 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VCX3BQ9H321 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VCX3BQ9H321 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VCX3BQ9H321 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
VCX3BQ9H321 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.93■□□□□ 0.78
VCX3BQ9H321 AC026471.6-201ENST00000622954 1905 ntBASIC19.93■□□□□ 0.78
VCX3BQ9H321 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.93■□□□□ 0.78
VCX3BQ9H321 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
VCX3BQ9H321 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
VCX3BQ9H321 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VCX3BQ9H321 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.92■□□□□ 0.78
VCX3BQ9H321 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
VCX3BQ9H321 AC009831.1-201ENST00000580420 1582 ntBASIC19.92■□□□□ 0.78
VCX3BQ9H321 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
VCX3BQ9H321 LONRF2P2-201ENST00000439212 571 ntBASIC19.92■□□□□ 0.78
VCX3BQ9H321 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.92■□□□□ 0.78
VCX3BQ9H321 AC133552.2-201ENST00000619106 1032 ntBASIC19.92■□□□□ 0.78
VCX3BQ9H321 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.92■□□□□ 0.78
VCX3BQ9H321 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.92■□□□□ 0.78
VCX3BQ9H321 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VCX3BQ9H321 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
VCX3BQ9H321 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.92■□□□□ 0.78
VCX3BQ9H321 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
VCX3BQ9H321 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
VCX3BQ9H321 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
VCX3BQ9H321 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
VCX3BQ9H321 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
VCX3BQ9H321 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VCX3BQ9H321 AC004687.1-201ENST00000579003 1625 ntBASIC19.91■□□□□ 0.78
VCX3BQ9H321 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VCX3BQ9H321 DUX4L4-201ENST00000566884 1269 ntBASIC19.91■□□□□ 0.78
VCX3BQ9H321 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VCX3BQ9H321 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
VCX3BQ9H321 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VCX3BQ9H321 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.91■□□□□ 0.78
VCX3BQ9H321 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.91■□□□□ 0.78
VCX3BQ9H321 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VCX3BQ9H321 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VCX3BQ9H321 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VCX3BQ9H321 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VCX3BQ9H321 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VCX3BQ9H321 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
VCX3BQ9H321 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VCX3BQ9H321 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VCX3BQ9H321 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
VCX3BQ9H321 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.9■□□□□ 0.78
VCX3BQ9H321 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.9■□□□□ 0.78
VCX3BQ9H321 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.9■□□□□ 0.78
VCX3BQ9H321 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
VCX3BQ9H321 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms