Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC10.63□□□□□ -0.71
KRTAP3-1Q9BYR8 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
KRTAP3-1Q9BYR8 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
KRTAP3-1Q9BYR8 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
KRTAP3-1Q9BYR8 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
KRTAP3-1Q9BYR8 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC10.63□□□□□ -0.71
KRTAP3-1Q9BYR8 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
KRTAP3-1Q9BYR8 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC10.62□□□□□ -0.71
KRTAP3-1Q9BYR8 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC10.62□□□□□ -0.71
KRTAP3-1Q9BYR8 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
KRTAP3-1Q9BYR8 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
KRTAP3-1Q9BYR8 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
KRTAP3-1Q9BYR8 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
KRTAP3-1Q9BYR8 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC10.62□□□□□ -0.71
KRTAP3-1Q9BYR8 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
KRTAP3-1Q9BYR8 AL512408.1-201ENST00000569378 2000 ntBASIC10.62□□□□□ -0.71
KRTAP3-1Q9BYR8 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC10.62□□□□□ -0.71
KRTAP3-1Q9BYR8 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
KRTAP3-1Q9BYR8 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
KRTAP3-1Q9BYR8 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
KRTAP3-1Q9BYR8 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC10.62□□□□□ -0.71
KRTAP3-1Q9BYR8 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
KRTAP3-1Q9BYR8 BID-204ENST00000399767 2129 ntTSL 2 BASIC10.62□□□□□ -0.71
KRTAP3-1Q9BYR8 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
KRTAP3-1Q9BYR8 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC10.62□□□□□ -0.71
KRTAP3-1Q9BYR8 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
KRTAP3-1Q9BYR8 QDPR-206ENST00000508623 601 ntTSL 3 BASIC10.62□□□□□ -0.71
KRTAP3-1Q9BYR8 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC10.62□□□□□ -0.71
KRTAP3-1Q9BYR8 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
KRTAP3-1Q9BYR8 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC10.62□□□□□ -0.71
KRTAP3-1Q9BYR8 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
KRTAP3-1Q9BYR8 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
KRTAP3-1Q9BYR8 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC10.62□□□□□ -0.71
KRTAP3-1Q9BYR8 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC10.62□□□□□ -0.71
KRTAP3-1Q9BYR8 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
KRTAP3-1Q9BYR8 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
KRTAP3-1Q9BYR8 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
KRTAP3-1Q9BYR8 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
KRTAP3-1Q9BYR8 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
KRTAP3-1Q9BYR8 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
KRTAP3-1Q9BYR8 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
KRTAP3-1Q9BYR8 USP39-204ENST00000409766 2033 ntTSL 2 BASIC10.62□□□□□ -0.71
KRTAP3-1Q9BYR8 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
KRTAP3-1Q9BYR8 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
KRTAP3-1Q9BYR8 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
KRTAP3-1Q9BYR8 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
KRTAP3-1Q9BYR8 BID-203ENST00000399765 1879 ntTSL 2 BASIC10.61□□□□□ -0.71
KRTAP3-1Q9BYR8 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
KRTAP3-1Q9BYR8 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
KRTAP3-1Q9BYR8 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC10.61□□□□□ -0.71
KRTAP3-1Q9BYR8 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
KRTAP3-1Q9BYR8 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
KRTAP3-1Q9BYR8 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC10.61□□□□□ -0.71
KRTAP3-1Q9BYR8 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
KRTAP3-1Q9BYR8 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
KRTAP3-1Q9BYR8 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC10.61□□□□□ -0.71
KRTAP3-1Q9BYR8 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC10.61□□□□□ -0.71
KRTAP3-1Q9BYR8 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
KRTAP3-1Q9BYR8 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC10.61□□□□□ -0.71
KRTAP3-1Q9BYR8 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
KRTAP3-1Q9BYR8 HES6-206ENST00000409574 738 ntTSL 2 BASIC10.61□□□□□ -0.71
KRTAP3-1Q9BYR8 AP005435.1-201ENST00000529293 1178 ntBASIC10.61□□□□□ -0.71
KRTAP3-1Q9BYR8 MIR3621-201ENST00000580529 85 ntBASIC10.61□□□□□ -0.71
KRTAP3-1Q9BYR8 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC10.61□□□□□ -0.71
KRTAP3-1Q9BYR8 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC10.61□□□□□ -0.71
KRTAP3-1Q9BYR8 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
KRTAP3-1Q9BYR8 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC10.61□□□□□ -0.71
KRTAP3-1Q9BYR8 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC10.61□□□□□ -0.71
KRTAP3-1Q9BYR8 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
KRTAP3-1Q9BYR8 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
KRTAP3-1Q9BYR8 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC10.61□□□□□ -0.71
KRTAP3-1Q9BYR8 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
KRTAP3-1Q9BYR8 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
KRTAP3-1Q9BYR8 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
KRTAP3-1Q9BYR8 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
KRTAP3-1Q9BYR8 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
KRTAP3-1Q9BYR8 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
KRTAP3-1Q9BYR8 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
KRTAP3-1Q9BYR8 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
KRTAP3-1Q9BYR8 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC10.6□□□□□ -0.71
KRTAP3-1Q9BYR8 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
KRTAP3-1Q9BYR8 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
KRTAP3-1Q9BYR8 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC10.6□□□□□ -0.71
KRTAP3-1Q9BYR8 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC10.6□□□□□ -0.71
KRTAP3-1Q9BYR8 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC10.6□□□□□ -0.71
KRTAP3-1Q9BYR8 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC10.6□□□□□ -0.71
KRTAP3-1Q9BYR8 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC10.6□□□□□ -0.71
KRTAP3-1Q9BYR8 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
KRTAP3-1Q9BYR8 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC10.6□□□□□ -0.71
KRTAP3-1Q9BYR8 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC10.6□□□□□ -0.71
KRTAP3-1Q9BYR8 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
KRTAP3-1Q9BYR8 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
KRTAP3-1Q9BYR8 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
KRTAP3-1Q9BYR8 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
KRTAP3-1Q9BYR8 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC10.6□□□□□ -0.71
KRTAP3-1Q9BYR8 KRT16P3-201ENST00000439127 1283 ntBASIC10.6□□□□□ -0.71
KRTAP3-1Q9BYR8 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC10.6□□□□□ -0.71
KRTAP3-1Q9BYR8 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC10.6□□□□□ -0.71
KRTAP3-1Q9BYR8 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
KRTAP3-1Q9BYR8 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms