Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 AL391422.3-201ENST00000603791 2761 ntBASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
LCE3DQ9BYE3 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
LCE3DQ9BYE3 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
LCE3DQ9BYE3 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
LCE3DQ9BYE3 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
LCE3DQ9BYE3 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
LCE3DQ9BYE3 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC5.65□□□□□ -1.5
LCE3DQ9BYE3 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
LCE3DQ9BYE3 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC5.65□□□□□ -1.5
LCE3DQ9BYE3 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
LCE3DQ9BYE3 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
LCE3DQ9BYE3 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC5.65□□□□□ -1.5
LCE3DQ9BYE3 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
LCE3DQ9BYE3 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
LCE3DQ9BYE3 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
LCE3DQ9BYE3 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
LCE3DQ9BYE3 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
LCE3DQ9BYE3 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
LCE3DQ9BYE3 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC5.65□□□□□ -1.5
LCE3DQ9BYE3 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
LCE3DQ9BYE3 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
LCE3DQ9BYE3 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
LCE3DQ9BYE3 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
LCE3DQ9BYE3 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
LCE3DQ9BYE3 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC5.65□□□□□ -1.5
LCE3DQ9BYE3 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
LCE3DQ9BYE3 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC5.65□□□□□ -1.5
LCE3DQ9BYE3 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
LCE3DQ9BYE3 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
LCE3DQ9BYE3 RPS2P35-201ENST00000443417 897 ntBASIC5.65□□□□□ -1.5
LCE3DQ9BYE3 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC5.65□□□□□ -1.5
LCE3DQ9BYE3 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC5.65□□□□□ -1.5
LCE3DQ9BYE3 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
LCE3DQ9BYE3 LSM7-203ENST00000585409 512 ntTSL 2 BASIC5.65□□□□□ -1.5
LCE3DQ9BYE3 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
LCE3DQ9BYE3 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
LCE3DQ9BYE3 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
LCE3DQ9BYE3 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
LCE3DQ9BYE3 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC5.65□□□□□ -1.51
LCE3DQ9BYE3 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
LCE3DQ9BYE3 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC5.65□□□□□ -1.51
LCE3DQ9BYE3 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
LCE3DQ9BYE3 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
LCE3DQ9BYE3 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
LCE3DQ9BYE3 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
LCE3DQ9BYE3 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC5.65□□□□□ -1.51
LCE3DQ9BYE3 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC5.65□□□□□ -1.51
LCE3DQ9BYE3 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
LCE3DQ9BYE3 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.51
LCE3DQ9BYE3 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
LCE3DQ9BYE3 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC5.65□□□□□ -1.51
LCE3DQ9BYE3 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
LCE3DQ9BYE3 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC5.65□□□□□ -1.51
LCE3DQ9BYE3 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
LCE3DQ9BYE3 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
LCE3DQ9BYE3 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
LCE3DQ9BYE3 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC5.65□□□□□ -1.51
LCE3DQ9BYE3 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
LCE3DQ9BYE3 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
LCE3DQ9BYE3 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
LCE3DQ9BYE3 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
LCE3DQ9BYE3 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC5.65□□□□□ -1.51
LCE3DQ9BYE3 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
LCE3DQ9BYE3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC5.65□□□□□ -1.51
LCE3DQ9BYE3 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.51
LCE3DQ9BYE3 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
LCE3DQ9BYE3 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms