Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NICN1Q9BSH3 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NICN1Q9BSH3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NICN1Q9BSH3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NICN1Q9BSH3 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NICN1Q9BSH3 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
NICN1Q9BSH3 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.94■□□□□ 0.46
NICN1Q9BSH3 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NICN1Q9BSH3 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NICN1Q9BSH3 SYT6-210ENST00000641643 1587 ntBASIC17.94■□□□□ 0.46
NICN1Q9BSH3 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NICN1Q9BSH3 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
NICN1Q9BSH3 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.94■□□□□ 0.46
NICN1Q9BSH3 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.94■□□□□ 0.46
NICN1Q9BSH3 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NICN1Q9BSH3 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NICN1Q9BSH3 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
NICN1Q9BSH3 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.94■□□□□ 0.46
NICN1Q9BSH3 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NICN1Q9BSH3 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
NICN1Q9BSH3 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
NICN1Q9BSH3 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NICN1Q9BSH3 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NICN1Q9BSH3 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NICN1Q9BSH3 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NICN1Q9BSH3 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
NICN1Q9BSH3 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NICN1Q9BSH3 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
NICN1Q9BSH3 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NICN1Q9BSH3 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NICN1Q9BSH3 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
NICN1Q9BSH3 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC17.93■□□□□ 0.46
NICN1Q9BSH3 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NICN1Q9BSH3 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
NICN1Q9BSH3 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
NICN1Q9BSH3 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
NICN1Q9BSH3 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
NICN1Q9BSH3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.93■□□□□ 0.46
NICN1Q9BSH3 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NICN1Q9BSH3 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NICN1Q9BSH3 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
NICN1Q9BSH3 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NICN1Q9BSH3 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NICN1Q9BSH3 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NICN1Q9BSH3 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC17.92■□□□□ 0.46
NICN1Q9BSH3 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
NICN1Q9BSH3 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NICN1Q9BSH3 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
NICN1Q9BSH3 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.92■□□□□ 0.46
NICN1Q9BSH3 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.92■□□□□ 0.46
NICN1Q9BSH3 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.92■□□□□ 0.46
NICN1Q9BSH3 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.92■□□□□ 0.46
NICN1Q9BSH3 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
NICN1Q9BSH3 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
NICN1Q9BSH3 SRR-208ENST00000576848 588 ntTSL 4 BASIC17.92■□□□□ 0.46
NICN1Q9BSH3 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.92■□□□□ 0.46
NICN1Q9BSH3 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
NICN1Q9BSH3 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
NICN1Q9BSH3 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
NICN1Q9BSH3 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.92■□□□□ 0.46
NICN1Q9BSH3 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NICN1Q9BSH3 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NICN1Q9BSH3 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.91■□□□□ 0.46
NICN1Q9BSH3 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NICN1Q9BSH3 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NICN1Q9BSH3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NICN1Q9BSH3 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
NICN1Q9BSH3 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NICN1Q9BSH3 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
NICN1Q9BSH3 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.91■□□□□ 0.46
NICN1Q9BSH3 AP005435.1-201ENST00000529293 1178 ntBASIC17.91■□□□□ 0.46
NICN1Q9BSH3 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC17.91■□□□□ 0.46
NICN1Q9BSH3 AL138724.1-201ENST00000606771 1088 ntBASIC17.91■□□□□ 0.46
NICN1Q9BSH3 AC136469.2-201ENST00000623944 1028 ntBASIC17.91■□□□□ 0.46
NICN1Q9BSH3 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NICN1Q9BSH3 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.91■□□□□ 0.46
NICN1Q9BSH3 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NICN1Q9BSH3 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.91■□□□□ 0.46
NICN1Q9BSH3 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
NICN1Q9BSH3 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
NICN1Q9BSH3 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
NICN1Q9BSH3 AC006128.1-201ENST00000624704 1661 ntBASIC17.9■□□□□ 0.46
NICN1Q9BSH3 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
NICN1Q9BSH3 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NICN1Q9BSH3 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17.9■□□□□ 0.46
NICN1Q9BSH3 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NICN1Q9BSH3 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NICN1Q9BSH3 PLK5-205ENST00000642079 1969 ntBASIC17.9■□□□□ 0.46
NICN1Q9BSH3 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NICN1Q9BSH3 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.9■□□□□ 0.46
NICN1Q9BSH3 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.9■□□□□ 0.46
NICN1Q9BSH3 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NICN1Q9BSH3 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NICN1Q9BSH3 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NICN1Q9BSH3 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
NICN1Q9BSH3 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
NICN1Q9BSH3 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
NICN1Q9BSH3 AC073314.1-201ENST00000568729 2216 ntBASIC17.9■□□□□ 0.46
NICN1Q9BSH3 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
NICN1Q9BSH3 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms