Protein–RNA interactions for Protein: Q99959

PKP2, Plakophilin-2, humanhuman

Predictions only

Length 881 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2Q99959 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PKP2Q99959 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PKP2Q99959 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
PKP2Q99959 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PKP2Q99959 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PKP2Q99959 SMG8-203ENST00000578922 2178 ntBASIC19.71■□□□□ 0.75
PKP2Q99959 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
PKP2Q99959 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PKP2Q99959 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
PKP2Q99959 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
PKP2Q99959 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
PKP2Q99959 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PKP2Q99959 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PKP2Q99959 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PKP2Q99959 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PKP2Q99959 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PKP2Q99959 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.7■□□□□ 0.74
PKP2Q99959 MIR4508-201ENST00000584178 70 ntBASIC19.7■□□□□ 0.74
PKP2Q99959 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
PKP2Q99959 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PKP2Q99959 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PKP2Q99959 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.7■□□□□ 0.74
PKP2Q99959 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
PKP2Q99959 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
PKP2Q99959 AL162377.1-201ENST00000618844 1793 ntBASIC19.7■□□□□ 0.74
PKP2Q99959 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PKP2Q99959 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PKP2Q99959 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.69■□□□□ 0.74
PKP2Q99959 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
PKP2Q99959 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PKP2Q99959 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PKP2Q99959 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PKP2Q99959 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.69■□□□□ 0.74
PKP2Q99959 RARRES2P1-201ENST00000474487 481 ntBASIC19.69■□□□□ 0.74
PKP2Q99959 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.69■□□□□ 0.74
PKP2Q99959 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.69■□□□□ 0.74
PKP2Q99959 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.69■□□□□ 0.74
PKP2Q99959 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.69■□□□□ 0.74
PKP2Q99959 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
PKP2Q99959 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PKP2Q99959 AL512408.1-201ENST00000569378 2000 ntBASIC19.69■□□□□ 0.74
PKP2Q99959 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.69■□□□□ 0.74
PKP2Q99959 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PKP2Q99959 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PKP2Q99959 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PKP2Q99959 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PKP2Q99959 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PKP2Q99959 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PKP2Q99959 KRT8P33-201ENST00000508125 1423 ntBASIC19.68■□□□□ 0.74
PKP2Q99959 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PKP2Q99959 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.68■□□□□ 0.74
PKP2Q99959 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.68■□□□□ 0.74
PKP2Q99959 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PKP2Q99959 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PKP2Q99959 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PKP2Q99959 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PKP2Q99959 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.68■□□□□ 0.74
PKP2Q99959 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.68■□□□□ 0.74
PKP2Q99959 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
PKP2Q99959 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.68■□□□□ 0.74
PKP2Q99959 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PKP2Q99959 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.68■□□□□ 0.74
PKP2Q99959 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PKP2Q99959 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PKP2Q99959 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PKP2Q99959 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
PKP2Q99959 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PKP2Q99959 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PKP2Q99959 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PKP2Q99959 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PKP2Q99959 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PKP2Q99959 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.68■□□□□ 0.74
PKP2Q99959 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PKP2Q99959 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.67■□□□□ 0.74
PKP2Q99959 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
PKP2Q99959 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PKP2Q99959 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.67■□□□□ 0.74
PKP2Q99959 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PKP2Q99959 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PKP2Q99959 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.67■□□□□ 0.74
PKP2Q99959 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
PKP2Q99959 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
PKP2Q99959 AC137630.3-201ENST00000607245 391 ntBASIC19.67■□□□□ 0.74
PKP2Q99959 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.67■□□□□ 0.74
PKP2Q99959 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.67■□□□□ 0.74
PKP2Q99959 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.67■□□□□ 0.74
PKP2Q99959 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.67■□□□□ 0.74
PKP2Q99959 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.67■□□□□ 0.74
PKP2Q99959 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PKP2Q99959 AC007225.1-201ENST00000566331 1836 ntBASIC19.67■□□□□ 0.74
PKP2Q99959 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PKP2Q99959 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PKP2Q99959 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PKP2Q99959 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.66■□□□□ 0.74
PKP2Q99959 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
PKP2Q99959 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PKP2Q99959 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PKP2Q99959 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PKP2Q99959 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PKP2Q99959 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms