Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NR1H4Q96RI1 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.72■□□□□ 0.75
NR1H4Q96RI1 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NR1H4Q96RI1 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NR1H4Q96RI1 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.72■□□□□ 0.75
NR1H4Q96RI1 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.72■□□□□ 0.75
NR1H4Q96RI1 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
NR1H4Q96RI1 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NR1H4Q96RI1 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
NR1H4Q96RI1 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.72■□□□□ 0.75
NR1H4Q96RI1 RPS2P7-201ENST00000447334 885 ntBASIC19.72■□□□□ 0.75
NR1H4Q96RI1 SPCS2P3-201ENST00000500401 656 ntBASIC19.72■□□□□ 0.75
NR1H4Q96RI1 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NR1H4Q96RI1 AC027702.1-201ENST00000563810 1770 ntBASIC19.72■□□□□ 0.75
NR1H4Q96RI1 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.71■□□□□ 0.75
NR1H4Q96RI1 AC026471.6-201ENST00000622954 1905 ntBASIC19.71■□□□□ 0.75
NR1H4Q96RI1 AC020907.5-201ENST00000624372 1936 ntBASIC19.71■□□□□ 0.75
NR1H4Q96RI1 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
NR1H4Q96RI1 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
NR1H4Q96RI1 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
NR1H4Q96RI1 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NR1H4Q96RI1 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NR1H4Q96RI1 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
NR1H4Q96RI1 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.71■□□□□ 0.75
NR1H4Q96RI1 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NR1H4Q96RI1 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.71■□□□□ 0.75
NR1H4Q96RI1 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.71■□□□□ 0.75
NR1H4Q96RI1 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
NR1H4Q96RI1 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.71■□□□□ 0.75
NR1H4Q96RI1 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NR1H4Q96RI1 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NR1H4Q96RI1 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
NR1H4Q96RI1 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NR1H4Q96RI1 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NR1H4Q96RI1 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NR1H4Q96RI1 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NR1H4Q96RI1 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
NR1H4Q96RI1 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.7■□□□□ 0.74
NR1H4Q96RI1 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.7■□□□□ 0.74
NR1H4Q96RI1 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NR1H4Q96RI1 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NR1H4Q96RI1 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NR1H4Q96RI1 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NR1H4Q96RI1 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NR1H4Q96RI1 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
NR1H4Q96RI1 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NR1H4Q96RI1 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
NR1H4Q96RI1 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
NR1H4Q96RI1 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.7■□□□□ 0.74
NR1H4Q96RI1 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.7■□□□□ 0.74
NR1H4Q96RI1 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.7■□□□□ 0.74
NR1H4Q96RI1 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.7■□□□□ 0.74
NR1H4Q96RI1 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NR1H4Q96RI1 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
NR1H4Q96RI1 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.7■□□□□ 0.74
NR1H4Q96RI1 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.7■□□□□ 0.74
NR1H4Q96RI1 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NR1H4Q96RI1 AC112907.3-201ENST00000577781 2400 ntBASIC19.7■□□□□ 0.74
NR1H4Q96RI1 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
NR1H4Q96RI1 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NR1H4Q96RI1 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.69■□□□□ 0.74
NR1H4Q96RI1 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NR1H4Q96RI1 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NR1H4Q96RI1 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.69■□□□□ 0.74
NR1H4Q96RI1 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NR1H4Q96RI1 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NR1H4Q96RI1 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.69■□□□□ 0.74
NR1H4Q96RI1 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NR1H4Q96RI1 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NR1H4Q96RI1 RARRES2P2-201ENST00000394842 485 ntBASIC19.69■□□□□ 0.74
NR1H4Q96RI1 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NR1H4Q96RI1 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.69■□□□□ 0.74
NR1H4Q96RI1 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC19.69■□□□□ 0.74
NR1H4Q96RI1 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NR1H4Q96RI1 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NR1H4Q96RI1 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NR1H4Q96RI1 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.69■□□□□ 0.74
NR1H4Q96RI1 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NR1H4Q96RI1 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NR1H4Q96RI1 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
NR1H4Q96RI1 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
NR1H4Q96RI1 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
NR1H4Q96RI1 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NR1H4Q96RI1 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NR1H4Q96RI1 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NR1H4Q96RI1 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
NR1H4Q96RI1 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
NR1H4Q96RI1 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
NR1H4Q96RI1 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.68■□□□□ 0.74
NR1H4Q96RI1 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.68■□□□□ 0.74
NR1H4Q96RI1 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.68■□□□□ 0.74
NR1H4Q96RI1 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NR1H4Q96RI1 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NR1H4Q96RI1 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NR1H4Q96RI1 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NR1H4Q96RI1 LINC01529-204ENST00000636474 1715 ntBASIC19.68■□□□□ 0.74
NR1H4Q96RI1 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.68■□□□□ 0.74
NR1H4Q96RI1 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NR1H4Q96RI1 AL162377.1-201ENST00000618844 1793 ntBASIC19.67■□□□□ 0.74
NR1H4Q96RI1 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms