Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
GAFA1Q96PS6 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC17.48■□□□□ 0.39
GAFA1Q96PS6 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.48■□□□□ 0.39
GAFA1Q96PS6 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
GAFA1Q96PS6 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GAFA1Q96PS6 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GAFA1Q96PS6 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GAFA1Q96PS6 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GAFA1Q96PS6 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GAFA1Q96PS6 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.47■□□□□ 0.39
GAFA1Q96PS6 AC137761.2-201ENST00000561729 223 ntBASIC17.47■□□□□ 0.39
GAFA1Q96PS6 AC145350.3-201ENST00000569033 163 ntBASIC17.47■□□□□ 0.39
GAFA1Q96PS6 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.47■□□□□ 0.39
GAFA1Q96PS6 UBE2DNL-204ENST00000602536 740 ntBASIC17.47■□□□□ 0.39
GAFA1Q96PS6 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GAFA1Q96PS6 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.47■□□□□ 0.39
GAFA1Q96PS6 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
GAFA1Q96PS6 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
GAFA1Q96PS6 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
GAFA1Q96PS6 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
GAFA1Q96PS6 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
GAFA1Q96PS6 AC007375.3-201ENST00000600936 2314 ntBASIC17.47■□□□□ 0.39
GAFA1Q96PS6 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
GAFA1Q96PS6 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.46■□□□□ 0.39
GAFA1Q96PS6 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GAFA1Q96PS6 FEM1AP4-201ENST00000443167 1987 ntBASIC17.46■□□□□ 0.39
GAFA1Q96PS6 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GAFA1Q96PS6 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GAFA1Q96PS6 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
GAFA1Q96PS6 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GAFA1Q96PS6 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.46■□□□□ 0.39
GAFA1Q96PS6 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.46■□□□□ 0.39
GAFA1Q96PS6 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.46■□□□□ 0.39
GAFA1Q96PS6 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
GAFA1Q96PS6 AL024507.2-201ENST00000606070 2574 ntBASIC17.46■□□□□ 0.39
GAFA1Q96PS6 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.46■□□□□ 0.39
GAFA1Q96PS6 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
GAFA1Q96PS6 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
GAFA1Q96PS6 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
GAFA1Q96PS6 KRT16P2-201ENST00000414673 1423 ntBASIC17.46■□□□□ 0.39
GAFA1Q96PS6 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
GAFA1Q96PS6 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.46■□□□□ 0.38
GAFA1Q96PS6 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GAFA1Q96PS6 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
GAFA1Q96PS6 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.45■□□□□ 0.38
GAFA1Q96PS6 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
GAFA1Q96PS6 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
GAFA1Q96PS6 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
GAFA1Q96PS6 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GAFA1Q96PS6 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.45■□□□□ 0.38
GAFA1Q96PS6 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.45■□□□□ 0.38
GAFA1Q96PS6 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GAFA1Q96PS6 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GAFA1Q96PS6 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.45■□□□□ 0.38
GAFA1Q96PS6 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GAFA1Q96PS6 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.45■□□□□ 0.38
GAFA1Q96PS6 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
GAFA1Q96PS6 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.45■□□□□ 0.38
GAFA1Q96PS6 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
GAFA1Q96PS6 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
GAFA1Q96PS6 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GAFA1Q96PS6 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.44■□□□□ 0.38
GAFA1Q96PS6 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.44■□□□□ 0.38
GAFA1Q96PS6 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.44■□□□□ 0.38
GAFA1Q96PS6 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GAFA1Q96PS6 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.44■□□□□ 0.38
GAFA1Q96PS6 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GAFA1Q96PS6 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
GAFA1Q96PS6 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GAFA1Q96PS6 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
GAFA1Q96PS6 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GAFA1Q96PS6 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GAFA1Q96PS6 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.44■□□□□ 0.38
GAFA1Q96PS6 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GAFA1Q96PS6 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
GAFA1Q96PS6 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GAFA1Q96PS6 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GAFA1Q96PS6 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GAFA1Q96PS6 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
GAFA1Q96PS6 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.43■□□□□ 0.38
GAFA1Q96PS6 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GAFA1Q96PS6 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.43■□□□□ 0.38
GAFA1Q96PS6 AC016769.1-201ENST00000409132 1010 ntBASIC17.43■□□□□ 0.38
GAFA1Q96PS6 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
GAFA1Q96PS6 AC022517.1-201ENST00000592429 346 ntBASIC17.43■□□□□ 0.38
GAFA1Q96PS6 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.43■□□□□ 0.38
GAFA1Q96PS6 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.43■□□□□ 0.38
GAFA1Q96PS6 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GAFA1Q96PS6 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
GAFA1Q96PS6 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
GAFA1Q96PS6 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GAFA1Q96PS6 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GAFA1Q96PS6 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
GAFA1Q96PS6 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.43■□□□□ 0.38
GAFA1Q96PS6 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GAFA1Q96PS6 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GAFA1Q96PS6 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GAFA1Q96PS6 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
GAFA1Q96PS6 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GAFA1Q96PS6 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms