Protein–RNA interactions for Protein: Q96KJ9

COX4I2, Cytochrome c oxidase subunit 4 isoform 2, mitochondrial, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I2Q96KJ9 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
COX4I2Q96KJ9 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COX4I2Q96KJ9 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COX4I2Q96KJ9 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.27■□□□□ 0.68
COX4I2Q96KJ9 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.27■□□□□ 0.68
COX4I2Q96KJ9 AC008764.7-201ENST00000593779 1081 ntBASIC19.27■□□□□ 0.68
COX4I2Q96KJ9 AL138724.1-201ENST00000606771 1088 ntBASIC19.27■□□□□ 0.68
COX4I2Q96KJ9 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
COX4I2Q96KJ9 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
COX4I2Q96KJ9 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
COX4I2Q96KJ9 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
COX4I2Q96KJ9 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
COX4I2Q96KJ9 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
COX4I2Q96KJ9 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COX4I2Q96KJ9 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.26■□□□□ 0.67
COX4I2Q96KJ9 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COX4I2Q96KJ9 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COX4I2Q96KJ9 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
COX4I2Q96KJ9 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.26■□□□□ 0.67
COX4I2Q96KJ9 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
COX4I2Q96KJ9 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.26■□□□□ 0.67
COX4I2Q96KJ9 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.26■□□□□ 0.67
COX4I2Q96KJ9 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.26■□□□□ 0.67
COX4I2Q96KJ9 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.26■□□□□ 0.67
COX4I2Q96KJ9 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.26■□□□□ 0.67
COX4I2Q96KJ9 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.26■□□□□ 0.67
COX4I2Q96KJ9 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.26■□□□□ 0.67
COX4I2Q96KJ9 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COX4I2Q96KJ9 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.26■□□□□ 0.67
COX4I2Q96KJ9 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.26■□□□□ 0.67
COX4I2Q96KJ9 FEM1AP4-201ENST00000443167 1987 ntBASIC19.26■□□□□ 0.67
COX4I2Q96KJ9 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COX4I2Q96KJ9 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
COX4I2Q96KJ9 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COX4I2Q96KJ9 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COX4I2Q96KJ9 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COX4I2Q96KJ9 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.25■□□□□ 0.67
COX4I2Q96KJ9 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
COX4I2Q96KJ9 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.25■□□□□ 0.67
COX4I2Q96KJ9 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
COX4I2Q96KJ9 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COX4I2Q96KJ9 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.25■□□□□ 0.67
COX4I2Q96KJ9 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.25■□□□□ 0.67
COX4I2Q96KJ9 AC099791.1-201ENST00000416440 715 ntBASIC19.25■□□□□ 0.67
COX4I2Q96KJ9 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.25■□□□□ 0.67
COX4I2Q96KJ9 AL137784.2-201ENST00000607332 1000 ntBASIC19.25■□□□□ 0.67
COX4I2Q96KJ9 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.25■□□□□ 0.67
COX4I2Q96KJ9 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.25■□□□□ 0.67
COX4I2Q96KJ9 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
COX4I2Q96KJ9 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
COX4I2Q96KJ9 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.25■□□□□ 0.67
COX4I2Q96KJ9 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
COX4I2Q96KJ9 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.25■□□□□ 0.67
COX4I2Q96KJ9 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.25■□□□□ 0.67
COX4I2Q96KJ9 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.24■□□□□ 0.67
COX4I2Q96KJ9 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.24■□□□□ 0.67
COX4I2Q96KJ9 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
COX4I2Q96KJ9 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.24■□□□□ 0.67
COX4I2Q96KJ9 AFG3L1P-217ENST00000557444 2447 ntBASIC19.24■□□□□ 0.67
COX4I2Q96KJ9 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
COX4I2Q96KJ9 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COX4I2Q96KJ9 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COX4I2Q96KJ9 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
COX4I2Q96KJ9 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COX4I2Q96KJ9 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COX4I2Q96KJ9 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
COX4I2Q96KJ9 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.24■□□□□ 0.67
COX4I2Q96KJ9 AC034268.1-201ENST00000441047 882 ntBASIC19.24■□□□□ 0.67
COX4I2Q96KJ9 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.24■□□□□ 0.67
COX4I2Q96KJ9 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.24■□□□□ 0.67
COX4I2Q96KJ9 IKBKGP1-201ENST00000612193 1073 ntBASIC19.24■□□□□ 0.67
COX4I2Q96KJ9 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.24■□□□□ 0.67
COX4I2Q96KJ9 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.24■□□□□ 0.67
COX4I2Q96KJ9 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
COX4I2Q96KJ9 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COX4I2Q96KJ9 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COX4I2Q96KJ9 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COX4I2Q96KJ9 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COX4I2Q96KJ9 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
COX4I2Q96KJ9 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
COX4I2Q96KJ9 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.24■□□□□ 0.67
COX4I2Q96KJ9 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.24■□□□□ 0.67
COX4I2Q96KJ9 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
COX4I2Q96KJ9 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
COX4I2Q96KJ9 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
COX4I2Q96KJ9 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COX4I2Q96KJ9 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
COX4I2Q96KJ9 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COX4I2Q96KJ9 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.23■□□□□ 0.67
COX4I2Q96KJ9 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.23■□□□□ 0.67
COX4I2Q96KJ9 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.23■□□□□ 0.67
COX4I2Q96KJ9 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COX4I2Q96KJ9 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
COX4I2Q96KJ9 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.23■□□□□ 0.67
COX4I2Q96KJ9 AC022517.1-201ENST00000592429 346 ntBASIC19.23■□□□□ 0.67
COX4I2Q96KJ9 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
COX4I2Q96KJ9 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
COX4I2Q96KJ9 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.23■□□□□ 0.67
COX4I2Q96KJ9 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
COX4I2Q96KJ9 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms