Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
VPS33AQ96AX1 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VPS33AQ96AX1 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.09■□□□□ 0.81
VPS33AQ96AX1 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
VPS33AQ96AX1 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
VPS33AQ96AX1 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
VPS33AQ96AX1 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.08■□□□□ 0.81
VPS33AQ96AX1 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
VPS33AQ96AX1 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
VPS33AQ96AX1 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
VPS33AQ96AX1 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
VPS33AQ96AX1 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.08■□□□□ 0.81
VPS33AQ96AX1 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.08■□□□□ 0.81
VPS33AQ96AX1 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.08■□□□□ 0.81
VPS33AQ96AX1 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.08■□□□□ 0.81
VPS33AQ96AX1 AC011298.3-201ENST00000615796 283 ntBASIC20.08■□□□□ 0.81
VPS33AQ96AX1 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.8
VPS33AQ96AX1 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
VPS33AQ96AX1 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.08■□□□□ 0.8
VPS33AQ96AX1 PLK5-205ENST00000642079 1969 ntBASIC20.08■□□□□ 0.8
VPS33AQ96AX1 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.08■□□□□ 0.8
VPS33AQ96AX1 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VPS33AQ96AX1 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VPS33AQ96AX1 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
VPS33AQ96AX1 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VPS33AQ96AX1 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
VPS33AQ96AX1 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
VPS33AQ96AX1 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
VPS33AQ96AX1 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
VPS33AQ96AX1 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
VPS33AQ96AX1 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
VPS33AQ96AX1 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.07■□□□□ 0.8
VPS33AQ96AX1 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.07■□□□□ 0.8
VPS33AQ96AX1 AL356441.2-201ENST00000443009 864 ntBASIC20.07■□□□□ 0.8
VPS33AQ96AX1 DUX4L19-201ENST00000557448 1267 ntBASIC20.07■□□□□ 0.8
VPS33AQ96AX1 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
VPS33AQ96AX1 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.07■□□□□ 0.8
VPS33AQ96AX1 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
VPS33AQ96AX1 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.07■□□□□ 0.8
VPS33AQ96AX1 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
VPS33AQ96AX1 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.07■□□□□ 0.8
VPS33AQ96AX1 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
VPS33AQ96AX1 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
VPS33AQ96AX1 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
VPS33AQ96AX1 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
VPS33AQ96AX1 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.06■□□□□ 0.8
VPS33AQ96AX1 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VPS33AQ96AX1 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VPS33AQ96AX1 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.06■□□□□ 0.8
VPS33AQ96AX1 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
VPS33AQ96AX1 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.06■□□□□ 0.8
VPS33AQ96AX1 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.06■□□□□ 0.8
VPS33AQ96AX1 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
VPS33AQ96AX1 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
VPS33AQ96AX1 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
VPS33AQ96AX1 AC006128.1-201ENST00000624704 1661 ntBASIC20.06■□□□□ 0.8
VPS33AQ96AX1 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
VPS33AQ96AX1 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
VPS33AQ96AX1 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
VPS33AQ96AX1 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VPS33AQ96AX1 AC073314.1-201ENST00000568729 2216 ntBASIC20.05■□□□□ 0.8
VPS33AQ96AX1 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VPS33AQ96AX1 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
VPS33AQ96AX1 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
VPS33AQ96AX1 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.05■□□□□ 0.8
VPS33AQ96AX1 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.05■□□□□ 0.8
VPS33AQ96AX1 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
VPS33AQ96AX1 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
VPS33AQ96AX1 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
VPS33AQ96AX1 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VPS33AQ96AX1 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
VPS33AQ96AX1 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VPS33AQ96AX1 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
VPS33AQ96AX1 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.05■□□□□ 0.8
VPS33AQ96AX1 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
VPS33AQ96AX1 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
VPS33AQ96AX1 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
VPS33AQ96AX1 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
VPS33AQ96AX1 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VPS33AQ96AX1 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
VPS33AQ96AX1 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
VPS33AQ96AX1 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VPS33AQ96AX1 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.04■□□□□ 0.8
VPS33AQ96AX1 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
VPS33AQ96AX1 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VPS33AQ96AX1 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
VPS33AQ96AX1 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.04■□□□□ 0.8
VPS33AQ96AX1 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VPS33AQ96AX1 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
VPS33AQ96AX1 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.04■□□□□ 0.8
VPS33AQ96AX1 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VPS33AQ96AX1 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
VPS33AQ96AX1 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
VPS33AQ96AX1 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
VPS33AQ96AX1 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
VPS33AQ96AX1 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
VPS33AQ96AX1 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.04■□□□□ 0.8
VPS33AQ96AX1 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
VPS33AQ96AX1 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
VPS33AQ96AX1 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms