Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 EED-207ENST00000528180 1745 ntTSL 5 BASIC18.5■□□□□ 0.55
USP9XQ93008 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.5■□□□□ 0.55
USP9XQ93008 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP9XQ93008 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.49■□□□□ 0.55
USP9XQ93008 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.49■□□□□ 0.55
USP9XQ93008 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.49■□□□□ 0.55
USP9XQ93008 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.49■□□□□ 0.55
USP9XQ93008 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
USP9XQ93008 AP003071.4-201ENST00000562276 1284 ntBASIC18.49■□□□□ 0.55
USP9XQ93008 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
USP9XQ93008 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP9XQ93008 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
USP9XQ93008 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP9XQ93008 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
USP9XQ93008 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
USP9XQ93008 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP9XQ93008 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP9XQ93008 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.49■□□□□ 0.55
USP9XQ93008 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.49■□□□□ 0.55
USP9XQ93008 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
USP9XQ93008 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP9XQ93008 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP9XQ93008 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
USP9XQ93008 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
USP9XQ93008 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
USP9XQ93008 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
USP9XQ93008 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
USP9XQ93008 AC124016.1-201ENST00000609552 612 ntBASIC18.48■□□□□ 0.55
USP9XQ93008 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC18.48■□□□□ 0.55
USP9XQ93008 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.48■□□□□ 0.55
USP9XQ93008 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.48■□□□□ 0.55
USP9XQ93008 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC18.48■□□□□ 0.55
USP9XQ93008 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
USP9XQ93008 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
USP9XQ93008 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.48■□□□□ 0.55
USP9XQ93008 AC239809.2-201ENST00000415381 517 ntBASIC18.48■□□□□ 0.55
USP9XQ93008 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
USP9XQ93008 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.48■□□□□ 0.55
USP9XQ93008 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
USP9XQ93008 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.48■□□□□ 0.55
USP9XQ93008 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.48■□□□□ 0.55
USP9XQ93008 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
USP9XQ93008 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
USP9XQ93008 AL139125.2-201ENST00000623134 1869 ntBASIC18.47■□□□□ 0.55
USP9XQ93008 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
USP9XQ93008 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.47■□□□□ 0.55
USP9XQ93008 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
USP9XQ93008 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.47■□□□□ 0.55
USP9XQ93008 LINC00526-201ENST00000581067 1875 ntBASIC18.47■□□□□ 0.55
USP9XQ93008 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.47■□□□□ 0.55
USP9XQ93008 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
USP9XQ93008 RARRES2P10-201ENST00000564312 460 ntBASIC18.47■□□□□ 0.55
USP9XQ93008 AC145285.6-201ENST00000604632 637 ntBASIC18.47■□□□□ 0.55
USP9XQ93008 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
USP9XQ93008 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.47■□□□□ 0.55
USP9XQ93008 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.47■□□□□ 0.55
USP9XQ93008 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
USP9XQ93008 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC18.46■□□□□ 0.55
USP9XQ93008 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP9XQ93008 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
USP9XQ93008 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.46■□□□□ 0.55
USP9XQ93008 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP9XQ93008 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.46■□□□□ 0.55
USP9XQ93008 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
USP9XQ93008 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.46■□□□□ 0.55
USP9XQ93008 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
USP9XQ93008 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP9XQ93008 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
USP9XQ93008 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP9XQ93008 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP9XQ93008 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.46■□□□□ 0.55
USP9XQ93008 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
USP9XQ93008 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.46■□□□□ 0.55
USP9XQ93008 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
USP9XQ93008 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.46■□□□□ 0.55
USP9XQ93008 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.46■□□□□ 0.55
USP9XQ93008 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP9XQ93008 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
USP9XQ93008 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.54
USP9XQ93008 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.46■□□□□ 0.54
USP9XQ93008 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP9XQ93008 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.45■□□□□ 0.54
USP9XQ93008 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.45■□□□□ 0.54
USP9XQ93008 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
USP9XQ93008 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
USP9XQ93008 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
USP9XQ93008 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.45■□□□□ 0.54
USP9XQ93008 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
USP9XQ93008 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
USP9XQ93008 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC18.45■□□□□ 0.54
USP9XQ93008 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.45■□□□□ 0.54
USP9XQ93008 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP9XQ93008 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.45■□□□□ 0.54
USP9XQ93008 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP9XQ93008 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
USP9XQ93008 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP9XQ93008 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.44■□□□□ 0.54
USP9XQ93008 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP9XQ93008 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.44■□□□□ 0.54
USP9XQ93008 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms