Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CCDC116Q8IYX3 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.74■□□□□ 0.75
CCDC116Q8IYX3 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC116Q8IYX3 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC116Q8IYX3 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CCDC116Q8IYX3 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC116Q8IYX3 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.74■□□□□ 0.75
CCDC116Q8IYX3 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC116Q8IYX3 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.74■□□□□ 0.75
CCDC116Q8IYX3 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.74■□□□□ 0.75
CCDC116Q8IYX3 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.74■□□□□ 0.75
CCDC116Q8IYX3 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC116Q8IYX3 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC116Q8IYX3 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC116Q8IYX3 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC116Q8IYX3 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC116Q8IYX3 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC116Q8IYX3 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC116Q8IYX3 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC116Q8IYX3 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC116Q8IYX3 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC116Q8IYX3 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC116Q8IYX3 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC116Q8IYX3 KRT18P14-201ENST00000534205 1250 ntBASIC19.73■□□□□ 0.75
CCDC116Q8IYX3 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC116Q8IYX3 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CCDC116Q8IYX3 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC116Q8IYX3 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC116Q8IYX3 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC116Q8IYX3 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC116Q8IYX3 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC116Q8IYX3 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC116Q8IYX3 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC116Q8IYX3 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC116Q8IYX3 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC116Q8IYX3 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC116Q8IYX3 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC116Q8IYX3 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC116Q8IYX3 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC116Q8IYX3 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC116Q8IYX3 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC116Q8IYX3 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC116Q8IYX3 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC116Q8IYX3 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC116Q8IYX3 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC116Q8IYX3 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC116Q8IYX3 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC116Q8IYX3 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CCDC116Q8IYX3 AL049796.1-201ENST00000565336 1766 ntBASIC19.71■□□□□ 0.75
CCDC116Q8IYX3 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.71■□□□□ 0.75
CCDC116Q8IYX3 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CCDC116Q8IYX3 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC116Q8IYX3 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC116Q8IYX3 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC116Q8IYX3 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CCDC116Q8IYX3 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC116Q8IYX3 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC116Q8IYX3 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC116Q8IYX3 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC116Q8IYX3 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC116Q8IYX3 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC116Q8IYX3 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC116Q8IYX3 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC116Q8IYX3 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CCDC116Q8IYX3 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC116Q8IYX3 AC061975.6-201ENST00000579045 1553 ntBASIC19.7■□□□□ 0.74
CCDC116Q8IYX3 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC116Q8IYX3 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC116Q8IYX3 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC116Q8IYX3 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC116Q8IYX3 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC116Q8IYX3 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC116Q8IYX3 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC116Q8IYX3 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC116Q8IYX3 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC116Q8IYX3 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.7■□□□□ 0.74
CCDC116Q8IYX3 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC116Q8IYX3 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CCDC116Q8IYX3 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CCDC116Q8IYX3 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC116Q8IYX3 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC116Q8IYX3 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CCDC116Q8IYX3 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC116Q8IYX3 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC116Q8IYX3 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CCDC116Q8IYX3 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CCDC116Q8IYX3 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC116Q8IYX3 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.69■□□□□ 0.74
CCDC116Q8IYX3 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC116Q8IYX3 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CCDC116Q8IYX3 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CCDC116Q8IYX3 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC116Q8IYX3 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC116Q8IYX3 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC116Q8IYX3 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.69■□□□□ 0.74
CCDC116Q8IYX3 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.69■□□□□ 0.74
CCDC116Q8IYX3 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC116Q8IYX3 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CCDC116Q8IYX3 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC116Q8IYX3 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms