Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LINC00346Q8IVM7 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LINC00346Q8IVM7 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.53■□□□□ 0.56
LINC00346Q8IVM7 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.53■□□□□ 0.56
LINC00346Q8IVM7 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LINC00346Q8IVM7 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LINC00346Q8IVM7 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.53■□□□□ 0.56
LINC00346Q8IVM7 AC012414.1-201ENST00000556676 535 ntBASIC18.53■□□□□ 0.56
LINC00346Q8IVM7 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.53■□□□□ 0.56
LINC00346Q8IVM7 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LINC00346Q8IVM7 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LINC00346Q8IVM7 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LINC00346Q8IVM7 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.53■□□□□ 0.56
LINC00346Q8IVM7 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LINC00346Q8IVM7 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
LINC00346Q8IVM7 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
LINC00346Q8IVM7 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LINC00346Q8IVM7 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
LINC00346Q8IVM7 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.52■□□□□ 0.56
LINC00346Q8IVM7 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
LINC00346Q8IVM7 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.52■□□□□ 0.56
LINC00346Q8IVM7 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LINC00346Q8IVM7 MIR6084-201ENST00000622012 110 ntBASIC18.52■□□□□ 0.56
LINC00346Q8IVM7 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LINC00346Q8IVM7 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LINC00346Q8IVM7 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LINC00346Q8IVM7 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LINC00346Q8IVM7 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.52■□□□□ 0.55
LINC00346Q8IVM7 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
LINC00346Q8IVM7 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINC00346Q8IVM7 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINC00346Q8IVM7 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LINC00346Q8IVM7 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LINC00346Q8IVM7 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
LINC00346Q8IVM7 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.51■□□□□ 0.55
LINC00346Q8IVM7 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LINC00346Q8IVM7 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.51■□□□□ 0.55
LINC00346Q8IVM7 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.51■□□□□ 0.55
LINC00346Q8IVM7 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.51■□□□□ 0.55
LINC00346Q8IVM7 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINC00346Q8IVM7 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
LINC00346Q8IVM7 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LINC00346Q8IVM7 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINC00346Q8IVM7 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINC00346Q8IVM7 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
LINC00346Q8IVM7 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LINC00346Q8IVM7 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LINC00346Q8IVM7 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LINC00346Q8IVM7 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.5■□□□□ 0.55
LINC00346Q8IVM7 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.5■□□□□ 0.55
LINC00346Q8IVM7 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LINC00346Q8IVM7 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
LINC00346Q8IVM7 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LINC00346Q8IVM7 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
LINC00346Q8IVM7 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.5■□□□□ 0.55
LINC00346Q8IVM7 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LINC00346Q8IVM7 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.5■□□□□ 0.55
LINC00346Q8IVM7 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.5■□□□□ 0.55
LINC00346Q8IVM7 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.5■□□□□ 0.55
LINC00346Q8IVM7 AC005837.3-201ENST00000612163 286 ntBASIC18.5■□□□□ 0.55
LINC00346Q8IVM7 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LINC00346Q8IVM7 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.5■□□□□ 0.55
LINC00346Q8IVM7 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
LINC00346Q8IVM7 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LINC00346Q8IVM7 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LINC00346Q8IVM7 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.5■□□□□ 0.55
LINC00346Q8IVM7 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.5■□□□□ 0.55
LINC00346Q8IVM7 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LINC00346Q8IVM7 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LINC00346Q8IVM7 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LINC00346Q8IVM7 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LINC00346Q8IVM7 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LINC00346Q8IVM7 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
LINC00346Q8IVM7 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
LINC00346Q8IVM7 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
LINC00346Q8IVM7 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
LINC00346Q8IVM7 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LINC00346Q8IVM7 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LINC00346Q8IVM7 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.49■□□□□ 0.55
LINC00346Q8IVM7 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.49■□□□□ 0.55
LINC00346Q8IVM7 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.49■□□□□ 0.55
LINC00346Q8IVM7 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.49■□□□□ 0.55
LINC00346Q8IVM7 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.49■□□□□ 0.55
LINC00346Q8IVM7 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.49■□□□□ 0.55
LINC00346Q8IVM7 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.49■□□□□ 0.55
LINC00346Q8IVM7 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LINC00346Q8IVM7 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LINC00346Q8IVM7 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LINC00346Q8IVM7 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LINC00346Q8IVM7 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.49■□□□□ 0.55
LINC00346Q8IVM7 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LINC00346Q8IVM7 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LINC00346Q8IVM7 AL157384.1-201ENST00000445995 2473 ntBASIC18.48■□□□□ 0.55
LINC00346Q8IVM7 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
LINC00346Q8IVM7 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.48■□□□□ 0.55
LINC00346Q8IVM7 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LINC00346Q8IVM7 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.48■□□□□ 0.55
LINC00346Q8IVM7 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.48■□□□□ 0.55
LINC00346Q8IVM7 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.48■□□□□ 0.55
LINC00346Q8IVM7 AC105265.2-201ENST00000467189 838 ntBASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms