Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20■□□□□ 0.79
PPP4R4Q6NUP7 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PPP4R4Q6NUP7 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PPP4R4Q6NUP7 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PPP4R4Q6NUP7 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PPP4R4Q6NUP7 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PPP4R4Q6NUP7 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PPP4R4Q6NUP7 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PPP4R4Q6NUP7 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.99■□□□□ 0.79
PPP4R4Q6NUP7 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.99■□□□□ 0.79
PPP4R4Q6NUP7 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PPP4R4Q6NUP7 MIR4767-201ENST00000582827 78 ntBASIC19.99■□□□□ 0.79
PPP4R4Q6NUP7 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PPP4R4Q6NUP7 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.99■□□□□ 0.79
PPP4R4Q6NUP7 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PPP4R4Q6NUP7 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
PPP4R4Q6NUP7 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PPP4R4Q6NUP7 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.99■□□□□ 0.79
PPP4R4Q6NUP7 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PPP4R4Q6NUP7 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.99■□□□□ 0.79
PPP4R4Q6NUP7 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.99■□□□□ 0.79
PPP4R4Q6NUP7 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.98■□□□□ 0.79
PPP4R4Q6NUP7 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PPP4R4Q6NUP7 OXCT2P1-201ENST00000447263 1535 ntBASIC19.98■□□□□ 0.79
PPP4R4Q6NUP7 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
PPP4R4Q6NUP7 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PPP4R4Q6NUP7 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PPP4R4Q6NUP7 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PPP4R4Q6NUP7 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
PPP4R4Q6NUP7 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.98■□□□□ 0.79
PPP4R4Q6NUP7 AC142381.2-201ENST00000566120 298 ntBASIC19.98■□□□□ 0.79
PPP4R4Q6NUP7 MIR3181-201ENST00000578512 73 ntBASIC19.98■□□□□ 0.79
PPP4R4Q6NUP7 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.98■□□□□ 0.79
PPP4R4Q6NUP7 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.98■□□□□ 0.79
PPP4R4Q6NUP7 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.98■□□□□ 0.79
PPP4R4Q6NUP7 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
PPP4R4Q6NUP7 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PPP4R4Q6NUP7 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.98■□□□□ 0.79
PPP4R4Q6NUP7 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PPP4R4Q6NUP7 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.98■□□□□ 0.79
PPP4R4Q6NUP7 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
PPP4R4Q6NUP7 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PPP4R4Q6NUP7 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
PPP4R4Q6NUP7 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
PPP4R4Q6NUP7 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PPP4R4Q6NUP7 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.97■□□□□ 0.79
PPP4R4Q6NUP7 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PPP4R4Q6NUP7 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.97■□□□□ 0.79
PPP4R4Q6NUP7 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
PPP4R4Q6NUP7 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PPP4R4Q6NUP7 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PPP4R4Q6NUP7 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.97■□□□□ 0.79
PPP4R4Q6NUP7 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PPP4R4Q6NUP7 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.97■□□□□ 0.79
PPP4R4Q6NUP7 DUX4L4-201ENST00000566884 1269 ntBASIC19.97■□□□□ 0.79
PPP4R4Q6NUP7 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.97■□□□□ 0.79
PPP4R4Q6NUP7 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PPP4R4Q6NUP7 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.97■□□□□ 0.79
PPP4R4Q6NUP7 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.97■□□□□ 0.79
PPP4R4Q6NUP7 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
PPP4R4Q6NUP7 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PPP4R4Q6NUP7 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PPP4R4Q6NUP7 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PPP4R4Q6NUP7 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PPP4R4Q6NUP7 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PPP4R4Q6NUP7 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.97■□□□□ 0.79
PPP4R4Q6NUP7 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PPP4R4Q6NUP7 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PPP4R4Q6NUP7 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
PPP4R4Q6NUP7 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
PPP4R4Q6NUP7 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PPP4R4Q6NUP7 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PPP4R4Q6NUP7 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
PPP4R4Q6NUP7 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PPP4R4Q6NUP7 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
PPP4R4Q6NUP7 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PPP4R4Q6NUP7 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PPP4R4Q6NUP7 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PPP4R4Q6NUP7 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.96■□□□□ 0.79
PPP4R4Q6NUP7 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
PPP4R4Q6NUP7 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
PPP4R4Q6NUP7 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PPP4R4Q6NUP7 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.96■□□□□ 0.79
PPP4R4Q6NUP7 AC005837.3-201ENST00000612163 286 ntBASIC19.96■□□□□ 0.79
PPP4R4Q6NUP7 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PPP4R4Q6NUP7 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
PPP4R4Q6NUP7 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PPP4R4Q6NUP7 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.96■□□□□ 0.79
PPP4R4Q6NUP7 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.96■□□□□ 0.79
PPP4R4Q6NUP7 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PPP4R4Q6NUP7 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
PPP4R4Q6NUP7 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.95■□□□□ 0.78
PPP4R4Q6NUP7 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
PPP4R4Q6NUP7 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
PPP4R4Q6NUP7 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.95■□□□□ 0.78
PPP4R4Q6NUP7 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
PPP4R4Q6NUP7 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.95■□□□□ 0.78
PPP4R4Q6NUP7 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PPP4R4Q6NUP7 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
PPP4R4Q6NUP7 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms