Protein–RNA interactions for Protein: Q5TDP6

LGSN, Lengsin, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGSNQ5TDP6 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LGSNQ5TDP6 AC011298.3-201ENST00000615796 283 ntBASIC21.08■□□□□ 0.97
LGSNQ5TDP6 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.08■□□□□ 0.97
LGSNQ5TDP6 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.08■□□□□ 0.96
LGSNQ5TDP6 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
LGSNQ5TDP6 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
LGSNQ5TDP6 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
LGSNQ5TDP6 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.08■□□□□ 0.96
LGSNQ5TDP6 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
LGSNQ5TDP6 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.08■□□□□ 0.96
LGSNQ5TDP6 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.07■□□□□ 0.96
LGSNQ5TDP6 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.07■□□□□ 0.96
LGSNQ5TDP6 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.07■□□□□ 0.96
LGSNQ5TDP6 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.07■□□□□ 0.96
LGSNQ5TDP6 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LGSNQ5TDP6 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LGSNQ5TDP6 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LGSNQ5TDP6 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
LGSNQ5TDP6 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
LGSNQ5TDP6 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.07■□□□□ 0.96
LGSNQ5TDP6 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.07■□□□□ 0.96
LGSNQ5TDP6 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.07■□□□□ 0.96
LGSNQ5TDP6 AL512631.2-201ENST00000604634 923 ntBASIC21.07■□□□□ 0.96
LGSNQ5TDP6 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.07■□□□□ 0.96
LGSNQ5TDP6 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LGSNQ5TDP6 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.07■□□□□ 0.96
LGSNQ5TDP6 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LGSNQ5TDP6 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
LGSNQ5TDP6 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.07■□□□□ 0.96
LGSNQ5TDP6 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LGSNQ5TDP6 GABARAPL3-202ENST00000624044 1851 ntBASIC21.07■□□□□ 0.96
LGSNQ5TDP6 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.07■□□□□ 0.96
LGSNQ5TDP6 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.06■□□□□ 0.96
LGSNQ5TDP6 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.06■□□□□ 0.96
LGSNQ5TDP6 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.06■□□□□ 0.96
LGSNQ5TDP6 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
LGSNQ5TDP6 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
LGSNQ5TDP6 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LGSNQ5TDP6 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LGSNQ5TDP6 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LGSNQ5TDP6 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.06■□□□□ 0.96
LGSNQ5TDP6 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LGSNQ5TDP6 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LGSNQ5TDP6 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
LGSNQ5TDP6 GUSBP5-201ENST00000418136 578 ntBASIC21.06■□□□□ 0.96
LGSNQ5TDP6 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LGSNQ5TDP6 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.06■□□□□ 0.96
LGSNQ5TDP6 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.06■□□□□ 0.96
LGSNQ5TDP6 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LGSNQ5TDP6 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LGSNQ5TDP6 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LGSNQ5TDP6 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LGSNQ5TDP6 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
LGSNQ5TDP6 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LGSNQ5TDP6 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.05■□□□□ 0.96
LGSNQ5TDP6 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
LGSNQ5TDP6 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LGSNQ5TDP6 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC21.05■□□□□ 0.96
LGSNQ5TDP6 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
LGSNQ5TDP6 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
LGSNQ5TDP6 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
LGSNQ5TDP6 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LGSNQ5TDP6 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.05■□□□□ 0.96
LGSNQ5TDP6 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LGSNQ5TDP6 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LGSNQ5TDP6 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LGSNQ5TDP6 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
LGSNQ5TDP6 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LGSNQ5TDP6 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LGSNQ5TDP6 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LGSNQ5TDP6 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
LGSNQ5TDP6 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LGSNQ5TDP6 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LGSNQ5TDP6 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LGSNQ5TDP6 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.04■□□□□ 0.96
LGSNQ5TDP6 SLC47A1P1-202ENST00000449666 945 ntBASIC21.04■□□□□ 0.96
LGSNQ5TDP6 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.04■□□□□ 0.96
LGSNQ5TDP6 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.04■□□□□ 0.96
LGSNQ5TDP6 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
LGSNQ5TDP6 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
LGSNQ5TDP6 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.04■□□□□ 0.96
LGSNQ5TDP6 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.04■□□□□ 0.96
LGSNQ5TDP6 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
LGSNQ5TDP6 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
LGSNQ5TDP6 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LGSNQ5TDP6 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
LGSNQ5TDP6 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LGSNQ5TDP6 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LGSNQ5TDP6 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC21.03■□□□□ 0.96
LGSNQ5TDP6 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LGSNQ5TDP6 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
LGSNQ5TDP6 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
LGSNQ5TDP6 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LGSNQ5TDP6 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
LGSNQ5TDP6 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LGSNQ5TDP6 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.03■□□□□ 0.96
LGSNQ5TDP6 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
LGSNQ5TDP6 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.03■□□□□ 0.96
LGSNQ5TDP6 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.03■□□□□ 0.96
LGSNQ5TDP6 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms