Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
UBR4Q5T4S7 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
UBR4Q5T4S7 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC11.68□□□□□ -0.54
UBR4Q5T4S7 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC11.68□□□□□ -0.54
UBR4Q5T4S7 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
UBR4Q5T4S7 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC11.68□□□□□ -0.54
UBR4Q5T4S7 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC11.68□□□□□ -0.54
UBR4Q5T4S7 AC144652.1-201ENST00000609974 1624 ntBASIC11.68□□□□□ -0.54
UBR4Q5T4S7 FAM8A6P-201ENST00000407496 1135 ntBASIC11.68□□□□□ -0.54
UBR4Q5T4S7 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
UBR4Q5T4S7 AC079598.2-202ENST00000546624 1451 ntBASIC11.68□□□□□ -0.54
UBR4Q5T4S7 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC11.67□□□□□ -0.54
UBR4Q5T4S7 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC11.67□□□□□ -0.54
UBR4Q5T4S7 KRT18P13-201ENST00000400056 1290 ntBASIC11.67□□□□□ -0.54
UBR4Q5T4S7 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC11.67□□□□□ -0.54
UBR4Q5T4S7 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
UBR4Q5T4S7 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC11.67□□□□□ -0.54
UBR4Q5T4S7 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
UBR4Q5T4S7 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
UBR4Q5T4S7 AC092803.2-201ENST00000564287 1899 ntBASIC11.67□□□□□ -0.54
UBR4Q5T4S7 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
UBR4Q5T4S7 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
UBR4Q5T4S7 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC11.67□□□□□ -0.54
UBR4Q5T4S7 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC11.67□□□□□ -0.54
UBR4Q5T4S7 REXO1L10P-201ENST00000615707 1290 ntBASIC11.67□□□□□ -0.54
UBR4Q5T4S7 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
UBR4Q5T4S7 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
UBR4Q5T4S7 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC11.67□□□□□ -0.54
UBR4Q5T4S7 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
UBR4Q5T4S7 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
UBR4Q5T4S7 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
UBR4Q5T4S7 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC11.67□□□□□ -0.54
UBR4Q5T4S7 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
UBR4Q5T4S7 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
UBR4Q5T4S7 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
UBR4Q5T4S7 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC11.67□□□□□ -0.54
UBR4Q5T4S7 AC010141.3-201ENST00000456659 717 ntBASIC11.67□□□□□ -0.54
UBR4Q5T4S7 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC11.67□□□□□ -0.54
UBR4Q5T4S7 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC11.67□□□□□ -0.54
UBR4Q5T4S7 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC11.67□□□□□ -0.54
UBR4Q5T4S7 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC11.67□□□□□ -0.54
UBR4Q5T4S7 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC11.67□□□□□ -0.54
UBR4Q5T4S7 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
UBR4Q5T4S7 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
UBR4Q5T4S7 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
UBR4Q5T4S7 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
UBR4Q5T4S7 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC11.66□□□□□ -0.54
UBR4Q5T4S7 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
UBR4Q5T4S7 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
UBR4Q5T4S7 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC11.66□□□□□ -0.54
UBR4Q5T4S7 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
UBR4Q5T4S7 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC11.66□□□□□ -0.54
UBR4Q5T4S7 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
UBR4Q5T4S7 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC11.66□□□□□ -0.54
UBR4Q5T4S7 AC245100.3-201ENST00000441281 285 ntBASIC11.66□□□□□ -0.54
UBR4Q5T4S7 NAPSB-206ENST00000562112 1266 ntBASIC11.66□□□□□ -0.54
UBR4Q5T4S7 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC11.66□□□□□ -0.54
UBR4Q5T4S7 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC11.66□□□□□ -0.54
UBR4Q5T4S7 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC11.66□□□□□ -0.54
UBR4Q5T4S7 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
UBR4Q5T4S7 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
UBR4Q5T4S7 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
UBR4Q5T4S7 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
UBR4Q5T4S7 DBP-204ENST00000599385 709 ntTSL 3 BASIC11.66□□□□□ -0.54
UBR4Q5T4S7 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
UBR4Q5T4S7 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC11.66□□□□□ -0.54
UBR4Q5T4S7 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
UBR4Q5T4S7 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC11.66□□□□□ -0.54
UBR4Q5T4S7 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
UBR4Q5T4S7 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC11.65□□□□□ -0.54
UBR4Q5T4S7 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC11.65□□□□□ -0.54
UBR4Q5T4S7 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
UBR4Q5T4S7 AC022616.7-201ENST00000525383 220 ntBASIC11.65□□□□□ -0.54
UBR4Q5T4S7 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC11.65□□□□□ -0.54
UBR4Q5T4S7 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC11.65□□□□□ -0.54
UBR4Q5T4S7 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
UBR4Q5T4S7 AL035633.1-201ENST00000406139 838 ntBASIC11.65□□□□□ -0.54
UBR4Q5T4S7 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC11.65□□□□□ -0.54
UBR4Q5T4S7 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC11.65□□□□□ -0.54
UBR4Q5T4S7 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC11.65□□□□□ -0.54
UBR4Q5T4S7 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
UBR4Q5T4S7 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC11.65□□□□□ -0.54
UBR4Q5T4S7 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
UBR4Q5T4S7 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
UBR4Q5T4S7 KRT8P45-201ENST00000414328 1447 ntBASIC11.65□□□□□ -0.54
UBR4Q5T4S7 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
UBR4Q5T4S7 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
UBR4Q5T4S7 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC11.65□□□□□ -0.54
UBR4Q5T4S7 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.55
UBR4Q5T4S7 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC11.65□□□□□ -0.55
UBR4Q5T4S7 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC11.65□□□□□ -0.55
UBR4Q5T4S7 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
UBR4Q5T4S7 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
UBR4Q5T4S7 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
UBR4Q5T4S7 AL022342.1-201ENST00000400363 863 ntBASIC11.64□□□□□ -0.55
UBR4Q5T4S7 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
UBR4Q5T4S7 AL161729.1-201ENST00000604104 1402 ntBASIC11.64□□□□□ -0.55
UBR4Q5T4S7 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
UBR4Q5T4S7 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC11.64□□□□□ -0.55
UBR4Q5T4S7 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC11.64□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms