Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.17■□□□□ 0.98
KHDC1Q4VXA5 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
KHDC1Q4VXA5 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
KHDC1Q4VXA5 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
KHDC1Q4VXA5 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KHDC1Q4VXA5 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
KHDC1Q4VXA5 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KHDC1Q4VXA5 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KHDC1Q4VXA5 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KHDC1Q4VXA5 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KHDC1Q4VXA5 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
KHDC1Q4VXA5 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
KHDC1Q4VXA5 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KHDC1Q4VXA5 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
KHDC1Q4VXA5 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
KHDC1Q4VXA5 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
KHDC1Q4VXA5 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.16■□□□□ 0.98
KHDC1Q4VXA5 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
KHDC1Q4VXA5 AL162430.1-201ENST00000480705 870 ntBASIC21.16■□□□□ 0.98
KHDC1Q4VXA5 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.16■□□□□ 0.98
KHDC1Q4VXA5 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.16■□□□□ 0.98
KHDC1Q4VXA5 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.16■□□□□ 0.98
KHDC1Q4VXA5 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KHDC1Q4VXA5 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.16■□□□□ 0.98
KHDC1Q4VXA5 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
KHDC1Q4VXA5 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
KHDC1Q4VXA5 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
KHDC1Q4VXA5 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.15■□□□□ 0.98
KHDC1Q4VXA5 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.15■□□□□ 0.98
KHDC1Q4VXA5 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.15■□□□□ 0.98
KHDC1Q4VXA5 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.15■□□□□ 0.98
KHDC1Q4VXA5 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
KHDC1Q4VXA5 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.15■□□□□ 0.98
KHDC1Q4VXA5 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KHDC1Q4VXA5 LINC01521-201ENST00000504184 1943 ntBASIC21.15■□□□□ 0.98
KHDC1Q4VXA5 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KHDC1Q4VXA5 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
KHDC1Q4VXA5 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
KHDC1Q4VXA5 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.15■□□□□ 0.98
KHDC1Q4VXA5 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
KHDC1Q4VXA5 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
KHDC1Q4VXA5 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
KHDC1Q4VXA5 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
KHDC1Q4VXA5 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.14■□□□□ 0.97
KHDC1Q4VXA5 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.14■□□□□ 0.97
KHDC1Q4VXA5 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.14■□□□□ 0.97
KHDC1Q4VXA5 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
KHDC1Q4VXA5 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
KHDC1Q4VXA5 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.14■□□□□ 0.97
KHDC1Q4VXA5 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.14■□□□□ 0.97
KHDC1Q4VXA5 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
KHDC1Q4VXA5 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
KHDC1Q4VXA5 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.14■□□□□ 0.97
KHDC1Q4VXA5 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
KHDC1Q4VXA5 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
KHDC1Q4VXA5 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
KHDC1Q4VXA5 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
KHDC1Q4VXA5 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
KHDC1Q4VXA5 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
KHDC1Q4VXA5 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KHDC1Q4VXA5 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
KHDC1Q4VXA5 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.13■□□□□ 0.97
KHDC1Q4VXA5 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.13■□□□□ 0.97
KHDC1Q4VXA5 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
KHDC1Q4VXA5 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KHDC1Q4VXA5 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.13■□□□□ 0.97
KHDC1Q4VXA5 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KHDC1Q4VXA5 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
KHDC1Q4VXA5 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.13■□□□□ 0.97
KHDC1Q4VXA5 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.13■□□□□ 0.97
KHDC1Q4VXA5 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
KHDC1Q4VXA5 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.13■□□□□ 0.97
KHDC1Q4VXA5 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
KHDC1Q4VXA5 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.13■□□□□ 0.97
KHDC1Q4VXA5 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
KHDC1Q4VXA5 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KHDC1Q4VXA5 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KHDC1Q4VXA5 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KHDC1Q4VXA5 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
KHDC1Q4VXA5 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
KHDC1Q4VXA5 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
KHDC1Q4VXA5 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
KHDC1Q4VXA5 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
KHDC1Q4VXA5 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
KHDC1Q4VXA5 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
KHDC1Q4VXA5 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.12■□□□□ 0.97
KHDC1Q4VXA5 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KHDC1Q4VXA5 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
KHDC1Q4VXA5 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
KHDC1Q4VXA5 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.12■□□□□ 0.97
KHDC1Q4VXA5 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.12■□□□□ 0.97
KHDC1Q4VXA5 KRT18P5-201ENST00000436075 1291 ntBASIC21.12■□□□□ 0.97
KHDC1Q4VXA5 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KHDC1Q4VXA5 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
KHDC1Q4VXA5 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.12■□□□□ 0.97
KHDC1Q4VXA5 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KHDC1Q4VXA5 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KHDC1Q4VXA5 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KHDC1Q4VXA5 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KHDC1Q4VXA5 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms