Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CHRFAM7AQ494W8 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHRFAM7AQ494W8 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHRFAM7AQ494W8 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CHRFAM7AQ494W8 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHRFAM7AQ494W8 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CHRFAM7AQ494W8 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHRFAM7AQ494W8 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHRFAM7AQ494W8 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.24■□□□□ 0.51
CHRFAM7AQ494W8 TMEM191A-211ENST00000637163 1067 ntBASIC18.24■□□□□ 0.51
CHRFAM7AQ494W8 AC073111.5-205ENST00000641717 521 ntBASIC18.24■□□□□ 0.51
CHRFAM7AQ494W8 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHRFAM7AQ494W8 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHRFAM7AQ494W8 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.24■□□□□ 0.51
CHRFAM7AQ494W8 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHRFAM7AQ494W8 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHRFAM7AQ494W8 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHRFAM7AQ494W8 AC133637.1-201ENST00000624115 1537 ntBASIC18.23■□□□□ 0.51
CHRFAM7AQ494W8 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHRFAM7AQ494W8 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.23■□□□□ 0.51
CHRFAM7AQ494W8 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.23■□□□□ 0.51
CHRFAM7AQ494W8 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHRFAM7AQ494W8 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHRFAM7AQ494W8 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHRFAM7AQ494W8 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHRFAM7AQ494W8 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHRFAM7AQ494W8 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHRFAM7AQ494W8 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.23■□□□□ 0.51
CHRFAM7AQ494W8 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHRFAM7AQ494W8 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHRFAM7AQ494W8 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHRFAM7AQ494W8 CDCA4P2-201ENST00000441182 718 ntBASIC18.23■□□□□ 0.51
CHRFAM7AQ494W8 AC006970.2-201ENST00000450065 779 ntBASIC18.23■□□□□ 0.51
CHRFAM7AQ494W8 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.23■□□□□ 0.51
CHRFAM7AQ494W8 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.23■□□□□ 0.51
CHRFAM7AQ494W8 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.23■□□□□ 0.51
CHRFAM7AQ494W8 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHRFAM7AQ494W8 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHRFAM7AQ494W8 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
CHRFAM7AQ494W8 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CHRFAM7AQ494W8 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CHRFAM7AQ494W8 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHRFAM7AQ494W8 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CHRFAM7AQ494W8 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHRFAM7AQ494W8 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHRFAM7AQ494W8 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHRFAM7AQ494W8 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHRFAM7AQ494W8 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHRFAM7AQ494W8 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.22■□□□□ 0.51
CHRFAM7AQ494W8 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
CHRFAM7AQ494W8 SLC25A24-204ENST00000569674 2357 ntBASIC18.22■□□□□ 0.51
CHRFAM7AQ494W8 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHRFAM7AQ494W8 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.22■□□□□ 0.51
CHRFAM7AQ494W8 AL355802.2-201ENST00000402069 882 ntBASIC18.22■□□□□ 0.51
CHRFAM7AQ494W8 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CHRFAM7AQ494W8 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHRFAM7AQ494W8 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.22■□□□□ 0.51
CHRFAM7AQ494W8 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.22■□□□□ 0.51
CHRFAM7AQ494W8 AC104771.1-201ENST00000603335 964 ntBASIC18.22■□□□□ 0.51
CHRFAM7AQ494W8 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.22■□□□□ 0.51
CHRFAM7AQ494W8 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CHRFAM7AQ494W8 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHRFAM7AQ494W8 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHRFAM7AQ494W8 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CHRFAM7AQ494W8 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHRFAM7AQ494W8 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.22■□□□□ 0.51
CHRFAM7AQ494W8 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHRFAM7AQ494W8 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CHRFAM7AQ494W8 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHRFAM7AQ494W8 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.22■□□□□ 0.51
CHRFAM7AQ494W8 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.22■□□□□ 0.51
CHRFAM7AQ494W8 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHRFAM7AQ494W8 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHRFAM7AQ494W8 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CHRFAM7AQ494W8 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHRFAM7AQ494W8 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHRFAM7AQ494W8 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHRFAM7AQ494W8 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.21■□□□□ 0.51
CHRFAM7AQ494W8 RAP2CP1-201ENST00000605103 478 ntBASIC18.21■□□□□ 0.51
CHRFAM7AQ494W8 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CHRFAM7AQ494W8 AC105233.4-201ENST00000642045 216 ntBASIC18.21■□□□□ 0.51
CHRFAM7AQ494W8 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHRFAM7AQ494W8 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHRFAM7AQ494W8 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHRFAM7AQ494W8 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHRFAM7AQ494W8 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.21■□□□□ 0.5
CHRFAM7AQ494W8 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
CHRFAM7AQ494W8 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHRFAM7AQ494W8 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.2■□□□□ 0.5
CHRFAM7AQ494W8 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHRFAM7AQ494W8 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHRFAM7AQ494W8 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.2■□□□□ 0.5
CHRFAM7AQ494W8 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CHRFAM7AQ494W8 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHRFAM7AQ494W8 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHRFAM7AQ494W8 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.2■□□□□ 0.5
CHRFAM7AQ494W8 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHRFAM7AQ494W8 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.2■□□□□ 0.5
CHRFAM7AQ494W8 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.2■□□□□ 0.5
CHRFAM7AQ494W8 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms