Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SYCNQ0VAF6 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SYCNQ0VAF6 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SYCNQ0VAF6 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC13.83□□□□□ -0.2
SYCNQ0VAF6 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SYCNQ0VAF6 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SYCNQ0VAF6 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC13.83□□□□□ -0.2
SYCNQ0VAF6 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC13.83□□□□□ -0.2
SYCNQ0VAF6 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC13.83□□□□□ -0.2
SYCNQ0VAF6 AL354811.1-201ENST00000610286 706 ntBASIC13.83□□□□□ -0.2
SYCNQ0VAF6 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
SYCNQ0VAF6 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
SYCNQ0VAF6 AC005229.4-201ENST00000610085 2198 ntBASIC13.83□□□□□ -0.2
SYCNQ0VAF6 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC13.83□□□□□ -0.2
SYCNQ0VAF6 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC13.83□□□□□ -0.2
SYCNQ0VAF6 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SYCNQ0VAF6 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC13.83□□□□□ -0.2
SYCNQ0VAF6 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SYCNQ0VAF6 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SYCNQ0VAF6 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC13.83□□□□□ -0.2
SYCNQ0VAF6 AC055733.4-201ENST00000638462 1354 ntBASIC13.83□□□□□ -0.2
SYCNQ0VAF6 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
SYCNQ0VAF6 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
SYCNQ0VAF6 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SYCNQ0VAF6 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SYCNQ0VAF6 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SYCNQ0VAF6 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
SYCNQ0VAF6 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC13.82□□□□□ -0.2
SYCNQ0VAF6 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC13.82□□□□□ -0.2
SYCNQ0VAF6 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SYCNQ0VAF6 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
SYCNQ0VAF6 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SYCNQ0VAF6 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC13.82□□□□□ -0.2
SYCNQ0VAF6 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SYCNQ0VAF6 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC13.82□□□□□ -0.2
SYCNQ0VAF6 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SYCNQ0VAF6 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SYCNQ0VAF6 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC13.82□□□□□ -0.2
SYCNQ0VAF6 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC13.82□□□□□ -0.2
SYCNQ0VAF6 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SYCNQ0VAF6 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC13.82□□□□□ -0.2
SYCNQ0VAF6 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SYCNQ0VAF6 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SYCNQ0VAF6 PARN-205ENST00000539279 1557 ntTSL 2 BASIC13.82□□□□□ -0.2
SYCNQ0VAF6 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SYCNQ0VAF6 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC13.82□□□□□ -0.2
SYCNQ0VAF6 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
SYCNQ0VAF6 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SYCNQ0VAF6 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SYCNQ0VAF6 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SYCNQ0VAF6 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC13.82□□□□□ -0.2
SYCNQ0VAF6 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SYCNQ0VAF6 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SYCNQ0VAF6 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SYCNQ0VAF6 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SYCNQ0VAF6 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SYCNQ0VAF6 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
SYCNQ0VAF6 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SYCNQ0VAF6 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC13.81□□□□□ -0.2
SYCNQ0VAF6 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SYCNQ0VAF6 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SYCNQ0VAF6 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SYCNQ0VAF6 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SYCNQ0VAF6 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SYCNQ0VAF6 HYI-206ENST00000372434 1025 ntTSL 5 BASIC13.81□□□□□ -0.2
SYCNQ0VAF6 NME4-202ENST00000382940 766 ntTSL 3 BASIC13.81□□□□□ -0.2
SYCNQ0VAF6 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SYCNQ0VAF6 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SYCNQ0VAF6 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SYCNQ0VAF6 AC012414.1-201ENST00000556676 535 ntBASIC13.81□□□□□ -0.2
SYCNQ0VAF6 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SYCNQ0VAF6 NME4-211ENST00000620944 1193 ntTSL 2 BASIC13.81□□□□□ -0.2
SYCNQ0VAF6 AL358852.1-201ENST00000623174 1268 ntBASIC13.81□□□□□ -0.2
SYCNQ0VAF6 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC13.81□□□□□ -0.2
SYCNQ0VAF6 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SYCNQ0VAF6 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SYCNQ0VAF6 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SYCNQ0VAF6 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC13.81□□□□□ -0.2
SYCNQ0VAF6 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SYCNQ0VAF6 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SYCNQ0VAF6 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SYCNQ0VAF6 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
SYCNQ0VAF6 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SYCNQ0VAF6 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC13.81□□□□□ -0.2
SYCNQ0VAF6 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SYCNQ0VAF6 USP48-205ENST00000421625 2818 ntTSL 2 BASIC13.81□□□□□ -0.2
SYCNQ0VAF6 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SYCNQ0VAF6 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC13.81□□□□□ -0.2
SYCNQ0VAF6 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC13.81□□□□□ -0.2
SYCNQ0VAF6 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SYCNQ0VAF6 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
SYCNQ0VAF6 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SYCNQ0VAF6 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
SYCNQ0VAF6 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
SYCNQ0VAF6 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SYCNQ0VAF6 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
SYCNQ0VAF6 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SYCNQ0VAF6 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SYCNQ0VAF6 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
SYCNQ0VAF6 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms