Protein–RNA interactions for Protein: P53973

HDA1, Histone deacetylase HDA1, yeastyeast

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HDA1P53973 PUB1YNL016W 1362 nt4.14□□□□□ -1.75
HDA1P53973 NUG1YER006W 1563 nt4.14□□□□□ -1.75
HDA1P53973 RNA14YMR061W 2034 nt4.14□□□□□ -1.75
HDA1P53973 ULP1YPL020C 1866 nt4.14□□□□□ -1.75
HDA1P53973 YDR340WYDR340W 303 nt4.14□□□□□ -1.75
HDA1P53973 YGL108CYGL108C 423 nt4.14□□□□□ -1.75
HDA1P53973 BIO2YGR286C 1128 nt4.14□□□□□ -1.75
HDA1P53973 YHI9YHR029C 885 nt4.14□□□□□ -1.75
HDA1P53973 YKT6YKL196C 603 nt4.14□□□□□ -1.75
HDA1P53973 VPS51YKR020W 495 nt4.14□□□□□ -1.75
HDA1P53973 HRI1YLR301W 735 nt4.14□□□□□ -1.75
HDA1P53973 GPI15YNL038W 690 nt4.14□□□□□ -1.75
HDA1P53973 YNL277W-AYNL277W-A 189 nt4.14□□□□□ -1.75
HDA1P53973 YPL077CYPL077C 723 nt4.14□□□□□ -1.75
HDA1P53973 STE24YJR117W 1362 nt4.14□□□□□ -1.75
HDA1P53973 UBP12YJL197W 3765 nt4.13□□□□□ -1.75
HDA1P53973 VHS3YOR054C 2025 nt4.13□□□□□ -1.75
HDA1P53973 ATP5YDR298C 639 nt4.13□□□□□ -1.75
HDA1P53973 MTC3YGL226W 372 nt4.13□□□□□ -1.75
HDA1P53973 ECL1YGR146C 636 nt4.13□□□□□ -1.75
HDA1P53973 YAR047CYAR047C 321 nt4.13□□□□□ -1.75
HDA1P53973 ARC18YLR370C 537 nt4.13□□□□□ -1.75
HDA1P53973 YPT53YNL093W 663 nt4.13□□□□□ -1.75
HDA1P53973 snR17asnR17a 333 nt4.13□□□□□ -1.75
HDA1P53973 YER077CYER077C 2067 nt4.13□□□□□ -1.75
HDA1P53973 GAL80YML051W 1308 nt4.13□□□□□ -1.75
HDA1P53973 SKO1YNL167C 1944 nt4.13□□□□□ -1.75
HDA1P53973 SNF2YOR290C 5112 nt4.12□□□□□ -1.75
HDA1P53973 RRN11YML043C 1524 nt4.12□□□□□ -1.75
HDA1P53973 RRP42YDL111C 798 nt4.12□□□□□ -1.75
HDA1P53973 MGT1YDL200C 567 nt4.12□□□□□ -1.75
HDA1P53973 YDR320W-BYDR320W-B 138 nt4.12□□□□□ -1.75
HDA1P53973 SPO73YER046W 432 nt4.12□□□□□ -1.75
HDA1P53973 YIR020C-BYIR020C-B 735 nt4.12□□□□□ -1.75
HDA1P53973 VPH2YKL119C 648 nt4.12□□□□□ -1.75
HDA1P53973 SDO1YLR022C 753 nt4.12□□□□□ -1.75
HDA1P53973 YMR153C-AYMR153C-A 336 nt4.12□□□□□ -1.75
HDA1P53973 YBR012CYBR012C 420 nt4.12□□□□□ -1.75
HDA1P53973 DER1YBR201W 636 nt4.12□□□□□ -1.75
HDA1P53973 NHX1YDR456W 1902 nt4.12□□□□□ -1.75
HDA1P53973 YSH1YLR277C 2340 nt4.12□□□□□ -1.75
HDA1P53973 SNT1YCR033W 3681 nt4.12□□□□□ -1.75
HDA1P53973 TRS120YDR407C 3870 nt4.12□□□□□ -1.75
HDA1P53973 RRN6YBL014C 2685 nt4.11□□□□□ -1.75
HDA1P53973 HOS3YPL116W 2094 nt4.11□□□□□ -1.75
HDA1P53973 HNT1YDL125C 477 nt4.11□□□□□ -1.75
HDA1P53973 tC(GCA)BtC(GCA)B 72 nt4.11□□□□□ -1.75
HDA1P53973 tC(GCA)GtC(GCA)G 72 nt4.11□□□□□ -1.75
HDA1P53973 tC(GCA)P1tC(GCA)P1 72 nt4.11□□□□□ -1.75
HDA1P53973 tC(GCA)P2tC(GCA)P2 72 nt4.11□□□□□ -1.75
HDA1P53973 FMP32YFL046W 624 nt4.11□□□□□ -1.75
HDA1P53973 YGR039WYGR039W 312 nt4.11□□□□□ -1.75
HDA1P53973 RPI1YIL119C 1224 nt4.11□□□□□ -1.75
HDA1P53973 CSE4YKL049C 690 nt4.11□□□□□ -1.75
HDA1P53973 SIL1YOL031C 1266 nt4.11□□□□□ -1.75
HDA1P53973 OAF3YKR064W 2592 nt4.11□□□□□ -1.75
HDA1P53973 SYO1YDL063C 1863 nt4.11□□□□□ -1.75
HDA1P53973 NDC80YIL144W 2076 nt4.1□□□□□ -1.75
HDA1P53973 RPN3YER021W 1572 nt4.1□□□□□ -1.75
HDA1P53973 RSC3YDR303C 2658 nt4.1□□□□□ -1.75
HDA1P53973 UTP25YIL091C 2166 nt4.1□□□□□ -1.75
HDA1P53973 TRX3YCR083W 384 nt4.1□□□□□ -1.75
HDA1P53973 HUR1YGL168W 333 nt4.1□□□□□ -1.75
HDA1P53973 SPO13YHR014W 876 nt4.1□□□□□ -1.75
HDA1P53973 YIR036W-AYIR036W-A 402 nt4.1□□□□□ -1.75
HDA1P53973 IES3YLR052W 753 nt4.1□□□□□ -1.75
HDA1P53973 YBL071CYBL071C 309 nt4.1□□□□□ -1.75
HDA1P53973 RFC3YNL290W 1023 nt4.1□□□□□ -1.75
HDA1P53973 CAT5YOR125C 702 nt4.1□□□□□ -1.75
HDA1P53973 YPL107WYPL107W 747 nt4.1□□□□□ -1.75
HDA1P53973 SVS1YPL163C 783 nt4.1□□□□□ -1.75
HDA1P53973 TPK2YPL203W 1143 nt4.1□□□□□ -1.75
HDA1P53973 HFD1YMR110C 1599 nt4.1□□□□□ -1.75
HDA1P53973 DAP2YHR028C 2457 nt4.09□□□□□ -1.75
HDA1P53973 AAD3YCR107W 1092 nt4.09□□□□□ -1.75
HDA1P53973 YDR115WYDR115W 318 nt4.09□□□□□ -1.75
HDA1P53973 YFL015CYFL015C 495 nt4.09□□□□□ -1.75
HDA1P53973 YGL039WYGL039W 1047 nt4.09□□□□□ -1.75
HDA1P53973 IDP2YLR174W 1239 nt4.09□□□□□ -1.75
HDA1P53973 NNT1YLR285W 786 nt4.09□□□□□ -1.75
HDA1P53973 SWC7YLR385C 399 nt4.09□□□□□ -1.75
HDA1P53973 GRE2YOL151W 1029 nt4.09□□□□□ -1.75
HDA1P53973 YBR103C-AYBR103C-A 144 nt4.09□□□□□ -1.75
HDA1P53973 MRPS9YBR146W 837 nt4.09□□□□□ -1.75
HDA1P53973 AVT5YBL089W 1380 nt4.09□□□□□ -1.75
HDA1P53973 YGR117CYGR117C 1431 nt4.09□□□□□ -1.75
HDA1P53973 UBP6YFR010W 1500 nt4.09□□□□□ -1.75
HDA1P53973 MSD1YPL104W 1977 nt4.09□□□□□ -1.76
HDA1P53973 TCO89YPL180W 2400 nt4.09□□□□□ -1.76
HDA1P53973 PSP1YDR505C 2526 nt4.09□□□□□ -1.76
HDA1P53973 BCK2YER167W 2556 nt4.08□□□□□ -1.76
HDA1P53973 15S_rRNA15S_rRNA 1649 nt4.08□□□□□ -1.76
HDA1P53973 VMA10YHR039C-A 345 nt4.08□□□□□ -1.76
HDA1P53973 EMC2YJR088C 879 nt4.08□□□□□ -1.76
HDA1P53973 AFB1YLR040C 675 nt4.08□□□□□ -1.76
HDA1P53973 ILV5YLR355C 1188 nt4.08□□□□□ -1.76
HDA1P53973 YML003WYML003W 873 nt4.08□□□□□ -1.76
HDA1P53973 YNL284C-AYNL284C-A 1323 nt4.08□□□□□ -1.76
HDA1P53973 CIT1YNR001C 1440 nt4.08□□□□□ -1.76
HDA1P53973 YOL019WYOL019W 1656 nt4.08□□□□□ -1.76
Retrieved 100 of 7,029 protein–RNA pairs in 19.5 ms