Protein–RNA interactions for Protein: P50750

CDK9, Cyclin-dependent kinase 9, humanhuman

Known RBP Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9P50750 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDK9P50750 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.1■□□□□ 0.81
CDK9P50750 IGHV3-19-201ENST00000521488 291 ntBASIC20.1■□□□□ 0.81
CDK9P50750 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CDK9P50750 SMUG1P1-201ENST00000590640 811 ntBASIC20.1■□□□□ 0.81
CDK9P50750 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDK9P50750 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CDK9P50750 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDK9P50750 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CDK9P50750 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CDK9P50750 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.1■□□□□ 0.81
CDK9P50750 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDK9P50750 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDK9P50750 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
CDK9P50750 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDK9P50750 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDK9P50750 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CDK9P50750 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.09■□□□□ 0.81
CDK9P50750 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.09■□□□□ 0.81
CDK9P50750 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.09■□□□□ 0.81
CDK9P50750 AL034346.1-201ENST00000568244 1277 ntBASIC20.09■□□□□ 0.81
CDK9P50750 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CDK9P50750 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.09■□□□□ 0.81
CDK9P50750 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.08■□□□□ 0.81
CDK9P50750 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.08■□□□□ 0.81
CDK9P50750 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.08■□□□□ 0.81
CDK9P50750 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.08■□□□□ 0.81
CDK9P50750 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.08■□□□□ 0.81
CDK9P50750 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CDK9P50750 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.08■□□□□ 0.81
CDK9P50750 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
CDK9P50750 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.08■□□□□ 0.81
CDK9P50750 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CDK9P50750 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CDK9P50750 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CDK9P50750 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.08■□□□□ 0.81
CDK9P50750 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CDK9P50750 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.8
CDK9P50750 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDK9P50750 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDK9P50750 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDK9P50750 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CDK9P50750 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.08■□□□□ 0.8
CDK9P50750 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.08■□□□□ 0.8
CDK9P50750 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CDK9P50750 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.07■□□□□ 0.8
CDK9P50750 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDK9P50750 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDK9P50750 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDK9P50750 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CDK9P50750 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.07■□□□□ 0.8
CDK9P50750 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDK9P50750 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDK9P50750 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.07■□□□□ 0.8
CDK9P50750 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDK9P50750 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
CDK9P50750 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.07■□□□□ 0.8
CDK9P50750 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CDK9P50750 Z98882.1-201ENST00000622160 2253 ntBASIC20.07■□□□□ 0.8
CDK9P50750 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CDK9P50750 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.07■□□□□ 0.8
CDK9P50750 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.07■□□□□ 0.8
CDK9P50750 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.06■□□□□ 0.8
CDK9P50750 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDK9P50750 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.06■□□□□ 0.8
CDK9P50750 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CDK9P50750 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDK9P50750 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.06■□□□□ 0.8
CDK9P50750 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.06■□□□□ 0.8
CDK9P50750 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDK9P50750 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CDK9P50750 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.06■□□□□ 0.8
CDK9P50750 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.06■□□□□ 0.8
CDK9P50750 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.06■□□□□ 0.8
CDK9P50750 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.06■□□□□ 0.8
CDK9P50750 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDK9P50750 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDK9P50750 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDK9P50750 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CDK9P50750 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.05■□□□□ 0.8
CDK9P50750 TSPY26P-201ENST00000476365 1326 ntBASIC20.05■□□□□ 0.8
CDK9P50750 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDK9P50750 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDK9P50750 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.05■□□□□ 0.8
CDK9P50750 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDK9P50750 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.05■□□□□ 0.8
CDK9P50750 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CDK9P50750 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDK9P50750 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.05■□□□□ 0.8
CDK9P50750 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDK9P50750 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.05■□□□□ 0.8
CDK9P50750 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.05■□□□□ 0.8
CDK9P50750 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CDK9P50750 AC104564.3-201ENST00000582367 638 ntBASIC20.05■□□□□ 0.8
CDK9P50750 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.05■□□□□ 0.8
CDK9P50750 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDK9P50750 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CDK9P50750 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.05■□□□□ 0.8
CDK9P50750 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.05■□□□□ 0.8
CDK9P50750 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms