Protein–RNA interactions for Protein: P47061

VPS53, Vacuolar protein sorting-associated protein 53, yeastyeast

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS53P47061 DAD2YKR083C 402 nt4.53□□□□□ -1.68
VPS53P47061 RDN5-6RDN5-6 121 nt4.53□□□□□ -1.68
VPS53P47061 YMR158W-BYMR158W-B 321 nt4.53□□□□□ -1.68
VPS53P47061 YGK3YOL128C 1128 nt4.53□□□□□ -1.68
VPS53P47061 TPO5YKL174C 1857 nt4.53□□□□□ -1.68
VPS53P47061 LST4YKL176C 2487 nt4.53□□□□□ -1.68
VPS53P47061 YCF1YDR135C 4548 nt4.53□□□□□ -1.68
VPS53P47061 YHR214C-CYHR214C-C 1437 nt4.53□□□□□ -1.68
VPS53P47061 TCB3YML072C 4638 nt4.53□□□□□ -1.68
VPS53P47061 AEP1YMR064W 1557 nt4.53□□□□□ -1.69
VPS53P47061 YGR027W-BYGR027W-B 5268 nt4.52□□□□□ -1.69
VPS53P47061 YLR227W-BYLR227W-B 5268 nt4.52□□□□□ -1.69
VPS53P47061 YPR158C-DYPR158C-D 5268 nt4.52□□□□□ -1.69
VPS53P47061 GLC3YEL011W 2115 nt4.52□□□□□ -1.69
VPS53P47061 YNL284C-AYNL284C-A 1323 nt4.52□□□□□ -1.69
VPS53P47061 VPS27YNR006W 1869 nt4.52□□□□□ -1.69
VPS53P47061 RAD1YPL022W 3303 nt4.52□□□□□ -1.69
VPS53P47061 YDR366CYDR366C 399 nt4.52□□□□□ -1.69
VPS53P47061 RPL27BYDR471W 411 nt4.52□□□□□ -1.69
VPS53P47061 SLX8YER116C 825 nt4.52□□□□□ -1.69
VPS53P47061 tQ(UUG)CtQ(UUG)C 72 nt4.52□□□□□ -1.69
VPS53P47061 tQ(UUG)D1tQ(UUG)D1 72 nt4.52□□□□□ -1.69
VPS53P47061 tQ(UUG)D2tQ(UUG)D2 72 nt4.52□□□□□ -1.69
VPS53P47061 tQ(UUG)D3tQ(UUG)D3 72 nt4.52□□□□□ -1.69
VPS53P47061 tQ(UUG)E1tQ(UUG)E1 72 nt4.52□□□□□ -1.69
VPS53P47061 tQ(UUG)HtQ(UUG)H 72 nt4.52□□□□□ -1.69
VPS53P47061 tQ(UUG)LtQ(UUG)L 72 nt4.52□□□□□ -1.69
VPS53P47061 DIB1YPR082C 432 nt4.52□□□□□ -1.69
VPS53P47061 SHG1YBR258C 429 nt4.52□□□□□ -1.69
VPS53P47061 YER077CYER077C 2067 nt4.52□□□□□ -1.69
VPS53P47061 SWP82YFL049W 1872 nt4.52□□□□□ -1.69
VPS53P47061 RPG1YBR079C 2895 nt4.51□□□□□ -1.69
VPS53P47061 YPK9YOR291W 4419 nt4.51□□□□□ -1.69
VPS53P47061 IZH3YLR023C 1632 nt4.51□□□□□ -1.69
VPS53P47061 ATG26YLR189C 3597 nt4.51□□□□□ -1.69
VPS53P47061 EXO5YBR163W 1758 nt4.51□□□□□ -1.69
VPS53P47061 CDC50YCR094W 1176 nt4.51□□□□□ -1.69
VPS53P47061 AHA1YDR214W 1053 nt4.51□□□□□ -1.69
VPS53P47061 OAR1YKL055C 837 nt4.51□□□□□ -1.69
VPS53P47061 YKL069WYKL069W 543 nt4.51□□□□□ -1.69
VPS53P47061 YPL025CYPL025C 558 nt4.51□□□□□ -1.69
VPS53P47061 YPL035CYPL035C 348 nt4.51□□□□□ -1.69
VPS53P47061 YPL107WYPL107W 747 nt4.51□□□□□ -1.69
VPS53P47061 YBR076C-AYBR076C-A 267 nt4.51□□□□□ -1.69
VPS53P47061 PHO88YBR106W 567 nt4.51□□□□□ -1.69
VPS53P47061 snR54snR54 86 nt4.51□□□□□ -1.69
VPS53P47061 RIA1YNL163C 3333 nt4.51□□□□□ -1.69
VPS53P47061 VID28YIL017C 2766 nt4.51□□□□□ -1.69
VPS53P47061 ALR2YFL050C 2577 nt4.51□□□□□ -1.69
VPS53P47061 KIN4YOR233W 2403 nt4.5□□□□□ -1.69
VPS53P47061 MFA1YDR461W 111 nt4.5□□□□□ -1.69
VPS53P47061 RPS0AYGR214W 759 nt4.5□□□□□ -1.69
VPS53P47061 RAD27YKL113C 1149 nt4.5□□□□□ -1.69
VPS53P47061 YOR082CYOR082C 342 nt4.5□□□□□ -1.69
VPS53P47061 YBR242WYBR242W 717 nt4.5□□□□□ -1.69
VPS53P47061 ARO80YDR421W 2853 nt4.5□□□□□ -1.69
VPS53P47061 VHS3YOR054C 2025 nt4.5□□□□□ -1.69
VPS53P47061 GPI19YDR437W 423 nt4.49□□□□□ -1.69
VPS53P47061 YGL108CYGL108C 423 nt4.49□□□□□ -1.69
VPS53P47061 BIO2YGR286C 1128 nt4.49□□□□□ -1.69
VPS53P47061 HIT1YJR055W 495 nt4.49□□□□□ -1.69
VPS53P47061 YKL162C-AYKL162C-A 153 nt4.49□□□□□ -1.69
VPS53P47061 AFB1YLR040C 675 nt4.49□□□□□ -1.69
VPS53P47061 AIM4YBR194W 372 nt4.49□□□□□ -1.69
VPS53P47061 YMR018WYMR018W 1545 nt4.49□□□□□ -1.69
VPS53P47061 RPN3YER021W 1572 nt4.48□□□□□ -1.69
VPS53P47061 DAL5YJR152W 1632 nt4.48□□□□□ -1.69
VPS53P47061 HNT1YDL125C 477 nt4.48□□□□□ -1.69
VPS53P47061 SLD5YDR489W 885 nt4.48□□□□□ -1.69
VPS53P47061 IES6YEL044W 501 nt4.48□□□□□ -1.69
VPS53P47061 RTS3YGR161C 792 nt4.48□□□□□ -1.69
VPS53P47061 VMA10YHR039C-A 345 nt4.48□□□□□ -1.69
VPS53P47061 EPT1YHR123W 1176 nt4.48□□□□□ -1.69
VPS53P47061 BET5YML077W 480 nt4.48□□□□□ -1.69
VPS53P47061 YML108WYML108W 318 nt4.48□□□□□ -1.69
VPS53P47061 GRE2YOL151W 1029 nt4.48□□□□□ -1.69
VPS53P47061 BIK1YCL029C 1323 nt4.47□□□□□ -1.69
VPS53P47061 SEC2YNL272C 2280 nt4.47□□□□□ -1.69
VPS53P47061 NAM2YLR382C 2685 nt4.47□□□□□ -1.69
VPS53P47061 YGL039WYGL039W 1047 nt4.47□□□□□ -1.69
VPS53P47061 SOL4YGR248W 768 nt4.47□□□□□ -1.69
VPS53P47061 YIL014C-AYIL014C-A 315 nt4.47□□□□□ -1.69
VPS53P47061 DPH1YIL103W 1278 nt4.47□□□□□ -1.69
VPS53P47061 SPC1YJR010C-A 285 nt4.47□□□□□ -1.69
VPS53P47061 YJR112W-AYJR112W-A 330 nt4.47□□□□□ -1.69
VPS53P47061 VPS63YLR261C 327 nt4.47□□□□□ -1.69
VPS53P47061 YOR203WYOR203W 354 nt4.47□□□□□ -1.69
VPS53P47061 NOC2YOR206W 2133 nt4.47□□□□□ -1.69
VPS53P47061 YOR392WYOR392W 444 nt4.47□□□□□ -1.69
VPS53P47061 YPR174CYPR174C 666 nt4.47□□□□□ -1.69
VPS53P47061 CMD1YBR109C 444 nt4.47□□□□□ -1.69
VPS53P47061 PKP2YGL059W 1476 nt4.47□□□□□ -1.69
VPS53P47061 VPS73YGL104C 1461 nt4.47□□□□□ -1.69
VPS53P47061 GAL11YOL051W 3246 nt4.47□□□□□ -1.69
VPS53P47061 CIT1YNR001C 1440 nt4.46□□□□□ -1.69
VPS53P47061 YDL240C-AYDL240C-A 138 nt4.46□□□□□ -1.7
VPS53P47061 SPT2YER161C 1002 nt4.46□□□□□ -1.7
VPS53P47061 SEC53YFL045C 765 nt4.46□□□□□ -1.7
VPS53P47061 YFR010W-AYFR010W-A 189 nt4.46□□□□□ -1.7
VPS53P47061 YOR331CYOR331C 558 nt4.46□□□□□ -1.7
Retrieved 100 of 7,029 protein–RNA pairs in 20.3 ms