Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
SOX11P35716 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
SOX11P35716 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.38■□□□□ 0.85
SOX11P35716 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SOX11P35716 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.38■□□□□ 0.85
SOX11P35716 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SOX11P35716 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.37■□□□□ 0.85
SOX11P35716 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SOX11P35716 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.37■□□□□ 0.85
SOX11P35716 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
SOX11P35716 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SOX11P35716 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SOX11P35716 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.37■□□□□ 0.85
SOX11P35716 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SOX11P35716 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
SOX11P35716 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.37■□□□□ 0.85
SOX11P35716 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SOX11P35716 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SOX11P35716 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.37■□□□□ 0.85
SOX11P35716 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.37■□□□□ 0.85
SOX11P35716 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SOX11P35716 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
SOX11P35716 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SOX11P35716 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.37■□□□□ 0.85
SOX11P35716 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SOX11P35716 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
SOX11P35716 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.37■□□□□ 0.85
SOX11P35716 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
SOX11P35716 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.37■□□□□ 0.85
SOX11P35716 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SOX11P35716 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SOX11P35716 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SOX11P35716 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SOX11P35716 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SOX11P35716 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.36■□□□□ 0.85
SOX11P35716 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SOX11P35716 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.36■□□□□ 0.85
SOX11P35716 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SOX11P35716 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
SOX11P35716 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.36■□□□□ 0.85
SOX11P35716 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.36■□□□□ 0.85
SOX11P35716 KRT18P5-201ENST00000436075 1291 ntBASIC20.36■□□□□ 0.85
SOX11P35716 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.36■□□□□ 0.85
SOX11P35716 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SOX11P35716 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.36■□□□□ 0.85
SOX11P35716 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
SOX11P35716 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.36■□□□□ 0.85
SOX11P35716 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SOX11P35716 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SOX11P35716 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SOX11P35716 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SOX11P35716 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SOX11P35716 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SOX11P35716 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.35■□□□□ 0.85
SOX11P35716 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.35■□□□□ 0.85
SOX11P35716 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.35■□□□□ 0.85
SOX11P35716 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SOX11P35716 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SOX11P35716 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
SOX11P35716 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
SOX11P35716 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
SOX11P35716 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.35■□□□□ 0.85
SOX11P35716 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SOX11P35716 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
SOX11P35716 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.34■□□□□ 0.85
SOX11P35716 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SOX11P35716 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.34■□□□□ 0.85
SOX11P35716 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.34■□□□□ 0.85
SOX11P35716 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.34■□□□□ 0.85
SOX11P35716 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SOX11P35716 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SOX11P35716 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SOX11P35716 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
SOX11P35716 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SOX11P35716 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
SOX11P35716 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SOX11P35716 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SOX11P35716 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SOX11P35716 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SOX11P35716 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SOX11P35716 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SOX11P35716 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.33■□□□□ 0.85
SOX11P35716 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SOX11P35716 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.85
SOX11P35716 CCDC92B-201ENST00000575506 885 ntBASIC20.33■□□□□ 0.85
SOX11P35716 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SOX11P35716 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.33■□□□□ 0.84
SOX11P35716 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SOX11P35716 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SOX11P35716 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.33■□□□□ 0.84
SOX11P35716 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SOX11P35716 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SOX11P35716 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SOX11P35716 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SOX11P35716 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.32■□□□□ 0.84
SOX11P35716 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
SOX11P35716 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.32■□□□□ 0.84
SOX11P35716 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SOX11P35716 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SOX11P35716 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms