Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CAPN1P07384 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CAPN1P07384 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CAPN1P07384 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.58■□□□□ 0.88
CAPN1P07384 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CAPN1P07384 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CAPN1P07384 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.58■□□□□ 0.88
CAPN1P07384 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.58■□□□□ 0.88
CAPN1P07384 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.57■□□□□ 0.88
CAPN1P07384 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
CAPN1P07384 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.57■□□□□ 0.88
CAPN1P07384 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CAPN1P07384 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.57■□□□□ 0.88
CAPN1P07384 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CAPN1P07384 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CAPN1P07384 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CAPN1P07384 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.57■□□□□ 0.88
CAPN1P07384 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.57■□□□□ 0.88
CAPN1P07384 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.57■□□□□ 0.88
CAPN1P07384 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CAPN1P07384 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.57■□□□□ 0.88
CAPN1P07384 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.57■□□□□ 0.88
CAPN1P07384 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.57■□□□□ 0.88
CAPN1P07384 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CAPN1P07384 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CAPN1P07384 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.57■□□□□ 0.88
CAPN1P07384 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CAPN1P07384 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CAPN1P07384 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CAPN1P07384 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
CAPN1P07384 BX005040.4-201ENST00000637145 1518 ntBASIC20.57■□□□□ 0.88
CAPN1P07384 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CAPN1P07384 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CAPN1P07384 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CAPN1P07384 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CAPN1P07384 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.56■□□□□ 0.88
CAPN1P07384 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CAPN1P07384 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CAPN1P07384 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CAPN1P07384 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CAPN1P07384 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.56■□□□□ 0.88
CAPN1P07384 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CAPN1P07384 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CAPN1P07384 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.56■□□□□ 0.88
CAPN1P07384 AC090192.1-201ENST00000517740 490 ntBASIC20.56■□□□□ 0.88
CAPN1P07384 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CAPN1P07384 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CAPN1P07384 AP006587.3-201ENST00000525742 1516 ntBASIC20.56■□□□□ 0.88
CAPN1P07384 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CAPN1P07384 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CAPN1P07384 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CAPN1P07384 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CAPN1P07384 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN1P07384 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN1P07384 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN1P07384 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN1P07384 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.55■□□□□ 0.88
CAPN1P07384 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN1P07384 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN1P07384 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN1P07384 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN1P07384 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN1P07384 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.55■□□□□ 0.88
CAPN1P07384 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.55■□□□□ 0.88
CAPN1P07384 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN1P07384 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CAPN1P07384 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN1P07384 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.54■□□□□ 0.88
CAPN1P07384 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN1P07384 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN1P07384 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN1P07384 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN1P07384 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN1P07384 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN1P07384 AC004911.1-201ENST00000416316 871 ntBASIC20.54■□□□□ 0.88
CAPN1P07384 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN1P07384 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.54■□□□□ 0.88
CAPN1P07384 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
CAPN1P07384 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN1P07384 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.54■□□□□ 0.88
CAPN1P07384 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CAPN1P07384 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN1P07384 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CAPN1P07384 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.54■□□□□ 0.88
CAPN1P07384 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN1P07384 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN1P07384 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CAPN1P07384 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CAPN1P07384 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CAPN1P07384 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CAPN1P07384 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CAPN1P07384 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CAPN1P07384 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CAPN1P07384 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CAPN1P07384 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.53■□□□□ 0.88
CAPN1P07384 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CAPN1P07384 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CAPN1P07384 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CAPN1P07384 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CAPN1P07384 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms