Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 SOX15-203ENST00000570788 1093 ntBASIC27.95■■■□□ 2.06
COL5A2P05997 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
COL5A2P05997 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC27.95■■■□□ 2.06
COL5A2P05997 GCA-201ENST00000233612 1694 ntTSL 2 BASIC27.94■■■□□ 2.06
COL5A2P05997 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
COL5A2P05997 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC27.94■■■□□ 2.06
COL5A2P05997 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC27.94■■■□□ 2.06
COL5A2P05997 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
COL5A2P05997 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
COL5A2P05997 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
COL5A2P05997 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
COL5A2P05997 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC27.94■■■□□ 2.06
COL5A2P05997 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
COL5A2P05997 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
COL5A2P05997 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
COL5A2P05997 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC27.93■■■□□ 2.06
COL5A2P05997 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
COL5A2P05997 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC27.93■■■□□ 2.06
COL5A2P05997 KRT17P3-201ENST00000420566 1262 ntBASIC27.93■■■□□ 2.06
COL5A2P05997 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC27.93■■■□□ 2.06
COL5A2P05997 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC27.93■■■□□ 2.06
COL5A2P05997 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC27.93■■■□□ 2.06
COL5A2P05997 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
COL5A2P05997 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC27.92■■■□□ 2.06
COL5A2P05997 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
COL5A2P05997 FAM210CP-201ENST00000445714 574 ntBASIC27.92■■■□□ 2.06
COL5A2P05997 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC27.92■■■□□ 2.06
COL5A2P05997 CDV3P1-201ENST00000471403 739 ntBASIC27.92■■■□□ 2.06
COL5A2P05997 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
COL5A2P05997 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC27.92■■■□□ 2.06
COL5A2P05997 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC27.91■■■□□ 2.06
COL5A2P05997 AC245052.3-201ENST00000450182 901 ntBASIC27.91■■■□□ 2.06
COL5A2P05997 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC27.91■■■□□ 2.06
COL5A2P05997 SPIB-206ENST00000596074 847 ntTSL 2 BASIC27.91■■■□□ 2.06
COL5A2P05997 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC27.91■■■□□ 2.06
COL5A2P05997 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC27.91■■■□□ 2.06
COL5A2P05997 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
COL5A2P05997 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
COL5A2P05997 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
COL5A2P05997 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
COL5A2P05997 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
COL5A2P05997 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
COL5A2P05997 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
COL5A2P05997 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC27.9■■■□□ 2.06
COL5A2P05997 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC27.9■■■□□ 2.06
COL5A2P05997 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC27.9■■■□□ 2.06
COL5A2P05997 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
COL5A2P05997 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC27.89■■■□□ 2.06
COL5A2P05997 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC27.89■■■□□ 2.06
COL5A2P05997 RPS20-210ENST00000523936 899 ntTSL 2 BASIC27.89■■■□□ 2.06
COL5A2P05997 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC27.89■■■□□ 2.06
COL5A2P05997 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.06
COL5A2P05997 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
COL5A2P05997 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC27.89■■■□□ 2.06
COL5A2P05997 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
COL5A2P05997 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC27.89■■■□□ 2.05
COL5A2P05997 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
COL5A2P05997 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
COL5A2P05997 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC27.88■■■□□ 2.05
COL5A2P05997 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC27.88■■■□□ 2.05
COL5A2P05997 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
COL5A2P05997 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC27.88■■■□□ 2.05
COL5A2P05997 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC27.88■■■□□ 2.05
COL5A2P05997 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
COL5A2P05997 VMO1-204ENST00000441199 741 ntTSL 2 BASIC27.88■■■□□ 2.05
COL5A2P05997 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
COL5A2P05997 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC27.88■■■□□ 2.05
COL5A2P05997 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC27.88■■■□□ 2.05
COL5A2P05997 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC27.88■■■□□ 2.05
COL5A2P05997 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
COL5A2P05997 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC27.87■■■□□ 2.05
COL5A2P05997 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC27.87■■■□□ 2.05
COL5A2P05997 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC27.87■■■□□ 2.05
COL5A2P05997 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
COL5A2P05997 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC27.87■■■□□ 2.05
COL5A2P05997 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
COL5A2P05997 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
COL5A2P05997 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
COL5A2P05997 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
COL5A2P05997 MIR1224-201ENST00000408193 85 ntBASIC27.87■■■□□ 2.05
COL5A2P05997 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
COL5A2P05997 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC27.87■■■□□ 2.05
COL5A2P05997 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
COL5A2P05997 OR2A1-AS1-207ENST00000486094 819 ntBASIC27.87■■■□□ 2.05
COL5A2P05997 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC27.87■■■□□ 2.05
COL5A2P05997 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC27.86■■■□□ 2.05
COL5A2P05997 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC27.86■■■□□ 2.05
COL5A2P05997 GCK-205ENST00000437084 1385 ntTSL 5 BASIC27.86■■■□□ 2.05
COL5A2P05997 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC27.86■■■□□ 2.05
COL5A2P05997 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
COL5A2P05997 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
COL5A2P05997 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC27.86■■■□□ 2.05
COL5A2P05997 AC211429.1-201ENST00000415277 523 ntBASIC27.86■■■□□ 2.05
COL5A2P05997 AC012618.2-201ENST00000428058 849 ntBASIC27.86■■■□□ 2.05
COL5A2P05997 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC27.86■■■□□ 2.05
COL5A2P05997 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC27.86■■■□□ 2.05
COL5A2P05997 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
COL5A2P05997 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC27.85■■■□□ 2.05
COL5A2P05997 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC27.85■■■□□ 2.05
COL5A2P05997 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms