Protein–RNA interactions for Protein: P05023

ATP1A1, Sodium/potassium-transporting ATPase subunit alpha-1, humanhuman

Known RBP Predictions only

Length 1,023 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1P05023 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
ATP1A1P05023 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
ATP1A1P05023 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC22.3■■□□□ 1.16
ATP1A1P05023 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
ATP1A1P05023 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC22.3■■□□□ 1.16
ATP1A1P05023 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC22.3■■□□□ 1.16
ATP1A1P05023 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
ATP1A1P05023 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
ATP1A1P05023 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
ATP1A1P05023 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
ATP1A1P05023 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
ATP1A1P05023 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
ATP1A1P05023 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
ATP1A1P05023 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC22.29■■□□□ 1.16
ATP1A1P05023 AL034346.1-201ENST00000568244 1277 ntBASIC22.29■■□□□ 1.16
ATP1A1P05023 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC22.29■■□□□ 1.16
ATP1A1P05023 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC22.29■■□□□ 1.16
ATP1A1P05023 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
ATP1A1P05023 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
ATP1A1P05023 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ATP1A1P05023 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
ATP1A1P05023 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC22.28■■□□□ 1.16
ATP1A1P05023 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC22.28■■□□□ 1.16
ATP1A1P05023 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
ATP1A1P05023 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC22.28■■□□□ 1.16
ATP1A1P05023 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
ATP1A1P05023 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC22.28■■□□□ 1.16
ATP1A1P05023 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC22.28■■□□□ 1.16
ATP1A1P05023 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
ATP1A1P05023 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
ATP1A1P05023 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ATP1A1P05023 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC22.28■■□□□ 1.16
ATP1A1P05023 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
ATP1A1P05023 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC22.28■■□□□ 1.16
ATP1A1P05023 AC110285.6-201ENST00000617652 491 ntBASIC22.28■■□□□ 1.16
ATP1A1P05023 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
ATP1A1P05023 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC22.28■■□□□ 1.16
ATP1A1P05023 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ATP1A1P05023 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ATP1A1P05023 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ATP1A1P05023 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
ATP1A1P05023 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ATP1A1P05023 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
ATP1A1P05023 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
ATP1A1P05023 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
ATP1A1P05023 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
ATP1A1P05023 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC22.27■■□□□ 1.16
ATP1A1P05023 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
ATP1A1P05023 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
ATP1A1P05023 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
ATP1A1P05023 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
ATP1A1P05023 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
ATP1A1P05023 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
ATP1A1P05023 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
ATP1A1P05023 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC22.27■■□□□ 1.16
ATP1A1P05023 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
ATP1A1P05023 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.15
ATP1A1P05023 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC22.27■■□□□ 1.15
ATP1A1P05023 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.15
ATP1A1P05023 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC22.26■■□□□ 1.15
ATP1A1P05023 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
ATP1A1P05023 ME2-218ENST00000640965 2476 ntTSL 5 BASIC22.26■■□□□ 1.15
ATP1A1P05023 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ATP1A1P05023 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC22.26■■□□□ 1.15
ATP1A1P05023 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
ATP1A1P05023 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC22.26■■□□□ 1.15
ATP1A1P05023 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
ATP1A1P05023 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
ATP1A1P05023 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
ATP1A1P05023 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
ATP1A1P05023 ERF-202ENST00000440177 2032 ntTSL 2 BASIC22.26■■□□□ 1.15
ATP1A1P05023 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
ATP1A1P05023 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
ATP1A1P05023 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ATP1A1P05023 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
ATP1A1P05023 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC22.25■■□□□ 1.15
ATP1A1P05023 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
ATP1A1P05023 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
ATP1A1P05023 AC027702.1-201ENST00000563810 1770 ntBASIC22.25■■□□□ 1.15
ATP1A1P05023 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC22.25■■□□□ 1.15
ATP1A1P05023 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ATP1A1P05023 UNC93B3-201ENST00000308076 687 ntBASIC22.25■■□□□ 1.15
ATP1A1P05023 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC22.25■■□□□ 1.15
ATP1A1P05023 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ATP1A1P05023 AL139246.5-201ENST00000606645 996 ntBASIC22.25■■□□□ 1.15
ATP1A1P05023 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ATP1A1P05023 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC22.25■■□□□ 1.15
ATP1A1P05023 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
ATP1A1P05023 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
ATP1A1P05023 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC22.24■■□□□ 1.15
ATP1A1P05023 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
ATP1A1P05023 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
ATP1A1P05023 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ATP1A1P05023 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ATP1A1P05023 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC22.24■■□□□ 1.15
ATP1A1P05023 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC22.24■■□□□ 1.15
ATP1A1P05023 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ATP1A1P05023 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC22.24■■□□□ 1.15
ATP1A1P05023 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
ATP1A1P05023 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms