Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.29■■□□□ 1
MT-ND3P03897 LINC01006-201ENST00000333319 2292 ntBASIC21.29■■□□□ 1
MT-ND3P03897 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MT-ND3P03897 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
MT-ND3P03897 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MT-ND3P03897 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
MT-ND3P03897 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.28■■□□□ 1
MT-ND3P03897 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.28■■□□□ 1
MT-ND3P03897 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MT-ND3P03897 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.28■■□□□ 1
MT-ND3P03897 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.28■■□□□ 1
MT-ND3P03897 AC010141.3-201ENST00000456659 717 ntBASIC21.28■■□□□ 1
MT-ND3P03897 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.28■■□□□ 1
MT-ND3P03897 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.28■■□□□ 1
MT-ND3P03897 AC092666.2-201ENST00000613287 246 ntBASIC21.28■■□□□ 1
MT-ND3P03897 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.28■■□□□ 1
MT-ND3P03897 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.28■■□□□ 1
MT-ND3P03897 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
MT-ND3P03897 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.28■■□□□ 1
MT-ND3P03897 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
MT-ND3P03897 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.27■■□□□ 1
MT-ND3P03897 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.27■■□□□ 1
MT-ND3P03897 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.27■■□□□ 1
MT-ND3P03897 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.27■■□□□ 1
MT-ND3P03897 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
MT-ND3P03897 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.27■■□□□ 1
MT-ND3P03897 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.27■■□□□ 1
MT-ND3P03897 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.27■■□□□ 1
MT-ND3P03897 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
MT-ND3P03897 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
MT-ND3P03897 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.27■■□□□ 1
MT-ND3P03897 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MT-ND3P03897 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MT-ND3P03897 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MT-ND3P03897 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MT-ND3P03897 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
MT-ND3P03897 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.26■□□□□ 0.99
MT-ND3P03897 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.26■□□□□ 0.99
MT-ND3P03897 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
MT-ND3P03897 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MT-ND3P03897 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
MT-ND3P03897 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.26■□□□□ 0.99
MT-ND3P03897 AC126544.1-201ENST00000580842 1059 ntBASIC21.26■□□□□ 0.99
MT-ND3P03897 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.26■□□□□ 0.99
MT-ND3P03897 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MT-ND3P03897 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MT-ND3P03897 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
MT-ND3P03897 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MT-ND3P03897 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MT-ND3P03897 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MT-ND3P03897 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
MT-ND3P03897 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MT-ND3P03897 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.25■□□□□ 0.99
MT-ND3P03897 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
MT-ND3P03897 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
MT-ND3P03897 OR2I1P-207ENST00000453522 948 ntBASIC21.25■□□□□ 0.99
MT-ND3P03897 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.25■□□□□ 0.99
MT-ND3P03897 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
MT-ND3P03897 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MT-ND3P03897 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
MT-ND3P03897 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MT-ND3P03897 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MT-ND3P03897 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MT-ND3P03897 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
MT-ND3P03897 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.24■□□□□ 0.99
MT-ND3P03897 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MT-ND3P03897 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
MT-ND3P03897 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.24■□□□□ 0.99
MT-ND3P03897 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.24■□□□□ 0.99
MT-ND3P03897 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MT-ND3P03897 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.24■□□□□ 0.99
MT-ND3P03897 FEM1AP1-201ENST00000431297 1995 ntBASIC21.24■□□□□ 0.99
MT-ND3P03897 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MT-ND3P03897 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MT-ND3P03897 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MT-ND3P03897 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
MT-ND3P03897 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC21.24■□□□□ 0.99
MT-ND3P03897 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.24■□□□□ 0.99
MT-ND3P03897 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MT-ND3P03897 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.23■□□□□ 0.99
MT-ND3P03897 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MT-ND3P03897 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MT-ND3P03897 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
MT-ND3P03897 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MT-ND3P03897 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.23■□□□□ 0.99
MT-ND3P03897 AL034346.1-201ENST00000568244 1277 ntBASIC21.23■□□□□ 0.99
MT-ND3P03897 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
MT-ND3P03897 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
MT-ND3P03897 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MT-ND3P03897 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MT-ND3P03897 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
MT-ND3P03897 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
MT-ND3P03897 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
MT-ND3P03897 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MT-ND3P03897 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
MT-ND3P03897 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
MT-ND3P03897 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.22■□□□□ 0.99
MT-ND3P03897 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.22■□□□□ 0.99
MT-ND3P03897 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.22■□□□□ 0.99
MT-ND3P03897 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms